Predicting possible immunomodulatory potential of Mutants of OligoNucleotides

This module also allows user to generate all possible single position mutants with their svm score so that user can choose the mutated oligonucletide with higher SVM score so as to design oligonucleotides that ould be better DNA based vaccine adjuvants than the parent sequence. All possible mutants are generated which will help user to get putative oligonucleotide with immunomodulatory adjuvant property. Please note that the input query sequence should be of the length 5 to 35.

Type or paste Oligo Nucleotide sequence in single letter code:


Prediction method:
Composition CpG Balanced   Composition+Motif CpG Balanced   Palindrome CpG Balanced 
Palindrome+Motif CpG Balanced 
Choose SVM threshold: