On this page, we have enlisted databases/repositories developed to maintain genome profiles, which may be further used for designing cancer immunotherapy. The given table comprises genome profile repositories. The first column represents the Name of the database, and the rest of the columns represents the Year, Description, Reference, and working status of the database. Click on the headers to sort them accordingly.
| Name | Year | Description | Reference | Functional |
|---|---|---|---|---|
| LOGpc | 2001 | Gene Expression Profiling Database of pan-cancers | No; Under Maintanence | |
| Oncomine | 2004 | A cancer microarray database and integrated data-mining platform | YES | |
| Oncomine 3.0 | 2007 | A collection of genes, pathways, and networks of 18,000 cancer gene expression profiles | YES | |
| NCBI dbGaP | 2007 | Individual-level phenotype, exposure, genotype, and sequence data | YES | |
| caBIG | 2007 | The Cancer Biomedical Informatics Grid | YES | |
| NCBI SRA Database | 2011 | Primary high-throughput sequencing data | YES | |
| CCLE | 2012 | A compilation of gene expression, chromosomal copy number and sequencing data from 947 human cancer cell lines | YES | |
| Survexpress | 2013 | A database for cancer gene expression data using survival analysis | YES | |
| GTEx | 2013 | The Genotype-Tissue Expression project | YES | |
| TCGA | 2015 | A comprehensive atlas of cancer genomic profiles | YES | |
| BioXpress | 2015 | Integrated RNA-seq-derived gene expression database for pan-cancer analysis | YES | |
| GEO | 2016 | High-throughput gene expression and functional genomics data sets | YES | |
| GDC Data portal | 2017 | Multi-omics (WGS, RNA-Seq, WXS, miRNA-Seq, etc.) and clinical data available for nearly 33 primary cancer types | YES | |
| T3CA | 2017 | The Cancer 3'UTR Atlas | YES | |
| cBioPortal | 2017 | Cancer genomics portal is an open platform for exploring multidimensional cancer genomics data | YES | |
| TCIA | 2017 | The Cancer Immunome Atlas | YES | |
| LInked Omics | 2018 | Multi-omics data and clinical data for 32 cancer types | YES | |
| HCMDB | 2018 | The human cancer metastasis database is a cross-platform transcriptome data on metastases | YES | |
| HCCdb | 2018 | A Database of Hepatocellular Carcinoma Expression Atlas | YES | |
| MiOncoCirc | 2019 | The Landscape of Circular RNA in Cancer | YES | |
| GENT2 | 2019 | Gene expression database for normal and tumor tissues | YES | |
| CancerEnD | 2020 | A Comprehensive Resource On Enhancer Information For TCGA Cancer Types | YES | |
| CircR2Cancer | 2020 | A manually curated database of associations between circRNAs and cancers | YES | |
| NGDC | 2020 | Database Resources of the National Genomics Data Center | YES |
ImmCancer: This website is maintained and developed at Raghava's Lab