Color Notation for PM Score |
< -16 | |
-16 to -14 | |
-14 to -12 | |
-12 to -10 | |
-10 to -8 | |
-8 to -6 | |
-6 to -4 | |
-4 to -2 | |
-2 to 0 | |
2 to 0 | |
4 to 2 | |
6 to 4 | |
8 to 6 | |
10 to 8 | |
12 to 10 | |
14 to 12 | |
16 to 14 | |
> 16 | |
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Single residue-based QM for HemoPI-2 dataset. For each position, frequency of each amino acid is calculated for both positive and negative dataset and final propensity value in each cell represents the substraction of frequency of a particular residue in negative dataset from that of positive dataset. eg. L is preferred at 2nd,9th,13th position in positive dataset. In contrast K (-11.19) is preferred in negative dataset at 3rd position.
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Res | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | 29 | 30 | A | -0.48 | -2.29 | -1.21 | -0.66 | -1.24 | 0.57 | 1.65 | -2.36 | -0.05 | 2.86 | -3.44 | 1.22 | 2.75 | 4.60 | 2.27 | -1.20 | -0.48 | 2.08 | -3.16 | -1.50 | 2.00 | -1.73 | -0.78 | 0.44 | -1.98 | 0.74 | -0.39 | 1.78 | 0.73 | -0.32 | C | -0.12 | 0.20 | -2.63 | 1.86 | 2.76 | 3.30 | -0.11 | -1.42 | -0.27 | 1.46 | 0.60 | -0.17 | 2.54 | 0.81 | 2.22 | 1.12 | 1.28 | 0.41 | 0.06 | 1.06 | 0.34 | -0.11 | 1.06 | 1.79 | -0.98 | -0.25 | -0.75 | 0.26 | -0.76 | -1.12 | D | -1.98 | -2.24 | -0.76 | 0.30 | 1.13 | -0.72 | -0.65 | 1.64 | -1.12 | -0.76 | -0.69 | -0.07 | -0.07 | -0.25 | -0.22 | 1.74 | -0.33 | -1.12 | 1.77 | 0.36 | 0.36 | -0.69 | -0.07 | -0.11 | 0.11 | 0.44 | 1.23 | 0.00 | 0.22 | -0.22 | E | -1.73 | -0.94 | 2.79 | 0.08 | -0.94 | 0.22 | -2.05 | -1.01 | -2.24 | -0.33 | -1.88 | 1.02 | -0.43 | -0.69 | -1.34 | -1.04 | -0.87 | -0.25 | -0.07 | -0.47 | -0.04 | 0.11 | -0.04 | -0.69 | -0.33 | -0.87 | -0.11 | -0.47 | -0.11 | -0.25 | F | 9.19 | 2.39 | 0.20 | -0.41 | -0.23 | 2.46 | 0.34 | 2.31 | 2.98 | 0.45 | 0.29 | -0.51 | -1.54 | -1.08 | 0.16 | -0.78 | 4.72 | 2.07 | 0.73 | -1.72 | 0.07 | -0.98 | 0.50 | 0.36 | -0.33 | -0.87 | -0.72 | -0.43 | -0.22 | -0.43 | G | -0.17 | 2.66 | 9.56 | 3.02 | 1.64 | 0.13 | 0.38 | 3.36 | -4.13 | 1.54 | -0.04 | -3.52 | 0.47 | -0.16 | 1.50 | 1.79 | -2.58 | -2.94 | -0.45 | -1.10 | -1.25 | 0.92 | -0.85 | 0.01 | 1.67 | -0.25 | 0.38 | 1.10 | -0.15 | -1.59 | H | -0.68 | -0.25 | 0.37 | -0.53 | -1.16 | -0.69 | -3.67 | -1.98 | 0.19 | -0.58 | -1.07 | -0.06 | -1.11 | -0.47 | -4.86 | 0.94 | 0.65 | 0.05 | -1.73 | 0.01 | -0.61 | 0.00 | -1.51 | -0.25 | 0.48 | 0.14 | -0.04 | -0.04 | 0.00 | 0.00 | I | 5.08 | 0.21 | -2.92 | 0.27 | 4.61 | -0.60 | -0.05 | 2.02 | -0.51 | 0.14 | 2.27 | 4.36 | -0.66 | -0.35 | -1.65 | 2.10 | 2.98 | -0.67 | -0.32 | 0.77 | 0.84 | -0.86 | -0.72 | 1.46 | 0.22 | -1.73 | 0.50 | 0.14 | 2.86 | -0.72 | K | -1.72 | -5.73 | -11.19 | 0.01 | 0.15 | -6.66 | 4.44 | 3.30 | 4.76 | -2.26 | 7.32 | 0.23 | -2.53 | -1.18 | 6.49 | 1.71 | -4.02 | 3.45 | 3.04 | 1.29 | 1.25 | 6.94 | 4.39 | 1.54 | 0.49 | 0.74 | -0.71 | -0.32 | -0.98 | 0.76 | L | -1.66 | 14.07 | 5.46 | -0.05 | 8.90 | 9.16 | 4.99 | 1.09 | 12.62 | 3.87 | 4.07 | 9.04 | 14.02 | 3.82 | 0.28 | 6.10 | 5.14 | -0.12 | 2.12 | 3.35 | 0.50 | -0.06 | 1.42 | 0.19 | -0.49 | 0.41 | 0.11 | 1.59 | -1.58 | -0.36 | M | -0.03 | -0.65 | 1.67 | 0.87 | -0.25 | 0.26 | -0.11 | -0.04 | 1.02 | -0.47 | -0.33 | -0.69 | -0.07 | -0.43 | 0.00 | -1.08 | 0.14 | -0.65 | -0.98 | 0.07 | -0.43 | -0.25 | 0.14 | -0.65 | 0.72 | 0.18 | 0.00 | -0.51 | 0.36 | 0.00 | N | 0.11 | 2.47 | -1.30 | 0.04 | -0.90 | -0.51 | -1.01 | -1.73 | -0.03 | -0.51 | -1.47 | -0.60 | -2.02 | -0.94 | 1.46 | -1.04 | 0.08 | -0.29 | -0.25 | 1.60 | 0.62 | -0.89 | 0.76 | -0.47 | -0.11 | 0.66 | 4.71 | -0.65 | -0.61 | 0.66 | P | 0.00 | -0.65 | 3.18 | -1.29 | -3.38 | -2.67 | 0.70 | 0.94 | 0.02 | 3.12 | 1.34 | 0.15 | 1.12 | 1.18 | -0.29 | -0.22 | -1.54 | 0.29 | -0.03 | -0.94 | 0.48 | -0.36 | -0.82 | -0.82 | 0.11 | -0.04 | -0.04 | -0.69 | 0.26 | 2.29 | Q | -0.54 | -0.51 | 1.16 | -0.25 | -0.76 | -0.25 | -1.52 | -1.55 | -1.37 | -0.04 | 0.32 | -2.49 | -0.69 | -1.33 | -1.94 | -1.04 | -0.54 | -0.07 | -0.94 | 0.44 | -0.65 | 0.26 | -1.12 | -0.11 | 0.91 | 1.27 | 0.11 | 1.45 | -0.43 | -0.22 | R | -2.25 | -0.48 | -5.61 | -2.89 | -6.22 | -4.27 | -6.16 | -3.92 | -2.54 | -1.49 | -1.19 | -2.36 | -6.26 | -0.70 | -1.22 | -1.87 | -1.08 | 1.90 | 0.33 | -0.64 | -1.04 | 0.63 | 0.69 | 0.55 | 0.51 | 2.03 | -0.11 | -0.71 | -0.33 | -0.22 | S | 2.07 | -4.50 | -1.47 | 3.30 | -1.80 | 2.21 | 1.79 | -2.88 | -2.01 | 0.99 | 1.44 | 0.81 | -0.71 | 0.95 | 3.01 | -0.74 | 0.22 | 3.67 | 0.38 | 1.13 | 1.71 | 0.59 | -1.33 | 2.07 | 2.03 | 1.92 | -0.61 | 0.84 | 0.14 | 0.22 | T | 0.04 | -0.47 | -0.51 | -0.43 | 3.53 | 0.29 | 0.62 | 3.71 | -2.20 | -0.20 | 1.12 | 2.83 | 1.85 | -0.51 | 1.61 | 0.74 | -0.10 | 0.76 | 1.85 | -0.32 | 1.74 | 0.33 | 0.50 | 0.73 | 0.11 | 1.23 | -1.11 | -0.54 | 0.72 | 0.29 | V | -1.83 | -0.96 | -0.98 | -4.89 | -2.58 | -1.92 | -2.37 | 1.17 | -1.18 | 1.19 | -0.35 | -0.80 | 5.20 | 1.48 | 0.74 | 1.12 | 1.97 | -1.66 | -0.97 | 2.10 | 1.92 | 3.05 | 2.43 | 0.87 | -1.15 | -1.29 | -0.15 | -0.98 | -0.07 | 0.22 | W | -3.46 | -1.20 | 7.26 | 3.89 | -3.36 | 1.22 | 3.42 | 0.10 | 2.59 | 1.49 | 3.19 | 0.84 | -0.07 | 0.76 | 0.40 | 0.44 | 0.36 | 0.87 | 1.34 | 1.27 | 0.29 | -0.43 | -0.21 | 0.00 | -0.22 | -0.22 | 0.00 | -0.43 | 0.00 | 0.00 | Y | 0.14 | -1.12 | -2.87 | -2.02 | 0.94 | -0.43 | 1.36 | 0.32 | -0.17 | -2.66 | -0.39 | -0.25 | -0.80 | -0.17 | -0.10 | 0.18 | 0.04 | -0.25 | -0.07 | -0.29 | -0.22 | -0.87 | 0.11 | -2.63 | 2.50 | 0.69 | -0.72 | 1.09 | 0.18 | 0.36 |
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