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The result page of search shows exclusive peptide/epitopes generated due to mutation [Neoepitope], the tissue of origin [Tissue], position of peptide in protein [Position], number of mismatches counted by aligning mutated and normal protein sequence [Num Mismatch, percentage of cell lines with this peptide over total number of cell lines [Promiscuity %]. The immune information include CTL epitopes (Yes/No), MHC I binders, MHC II binders (both given as number of alleles) and B cell epitopes (Yes/No). For more information, please click |
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Protein | Neoepitopes | Tissue | Position | Prot Mutation | cDNA Mutation | Mutation Type | Num Mismatch | Promiscuity (%) | Cell Line | CTL | MHC I | NHLApred | MHC II | Bcell | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CTNNB1 | APLSGKGNP | SKIN | 43 | p.S45del | c.131_133delCTT | In_Frame_Del | 2 | 0.22 | COLO783 | N | 0 | 0 | 0 | N | ||||||||||||
CTNNB1 | APLSGKGNP | LARGE_INTESTINE | 43 | p.S45del | c.131_133delCTT | In_Frame_Del | 2 | 0.22 | HCT116 | N | 0 | 0 | 0 | N | ||||||||||||
CTNNB1 | ATTTAPLSG | SKIN | 39 | p.S45del | c.131_133delCTT | In_Frame_Del | 3 | 0.22 | COLO783 | N | 0 | 0 | 0 | N | ||||||||||||
CTNNB1 | ATTTAPLSG | LARGE_INTESTINE | 39 | p.S45del | c.131_133delCTT | In_Frame_Del | 3 | 0.22 | HCT116 | N | 0 | 0 | 0 | N | ||||||||||||
CTNNB1 | GATTTAPLS | SKIN | 38 | p.S45del | c.131_133delCTT | In_Frame_Del | 2 | 0.22 | COLO783 | N | 1 | 0 | 0 | N | ||||||||||||
CTNNB1 | GATTTAPLS | LARGE_INTESTINE | 38 | p.S45del | c.131_133delCTT | In_Frame_Del | 2 | 0.22 | HCT116 | N | 1 | 0 | 0 | N | ||||||||||||
CTNNB1 | SGATTTAPL | SKIN | 37 | p.S45del | c.131_133delCTT | In_Frame_Del | 1 | 0.22 | COLO783 | N | 10 | 0 | 0 | N | ||||||||||||
CTNNB1 | SGATTTAPL | LARGE_INTESTINE | 37 | p.S45del | c.131_133delCTT | In_Frame_Del | 1 | 0.22 | HCT116 | N | 10 | 0 | 0 | N | ||||||||||||
CTNNB1 | TAPLSGKGN | SKIN | 42 | p.S45del | c.131_133delCTT | In_Frame_Del | 3 | 0.22 | COLO783 | N | 1 | 0 | 0 | N | ||||||||||||
CTNNB1 | TAPLSGKGN | LARGE_INTESTINE | 42 | p.S45del | c.131_133delCTT | In_Frame_Del | 3 | 0.22 | HCT116 | N | 1 | 0 | 0 | N | ||||||||||||
CTNNB1 | TTAPLSGKG | SKIN | 41 | p.S45del | c.131_133delCTT | In_Frame_Del | 3 | 0.22 | COLO783 | N | 0 | 0 | 0 | N | ||||||||||||
CTNNB1 | TTAPLSGKG | LARGE_INTESTINE | 41 | p.S45del | c.131_133delCTT | In_Frame_Del | 3 | 0.22 | HCT116 | N | 0 | 0 | 0 | N | ||||||||||||
CTNNB1 | TTTAPLSGK | SKIN | 40 | p.S45del | c.131_133delCTT | In_Frame_Del | 3 | 0.22 | COLO783 | N | 2 | 0 | 0 | N | ||||||||||||
CTNNB1 | TTTAPLSGK | LARGE_INTESTINE | 40 | p.S45del | c.131_133delCTT | In_Frame_Del | 3 | 0.22 | HCT116 | N | 2 | 0 | 0 | N | ||||||||||||
CTNNB1 | PLSGKGNPE | SKIN | 44 | p.S45del | c.131_133delCTT | In_Frame_Del | 1 | 0.33 | COLO783 | N | 0 | 0 | 0 | N | ||||||||||||
CTNNB1 | PLSGKGNPE | LARGE_INTESTINE | 44 | p.S45del | c.131_133delCTT | In_Frame_Del | 1 | 0.33 | HCT116 | N | 0 | 0 | 0 | N | ||||||||||||