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The result page of search shows exclusive peptide/epitopes generated due to mutation [Neoepitope], the tissue of origin [Tissue], position of peptide in protein [Position], number of mismatches counted by aligning mutated and normal protein sequence [Num Mismatch, percentage of cell lines with this peptide over total number of cell lines [Promiscuity %]. The immune information include CTL epitopes (Yes/No), MHC I binders, MHC II binders (both given as number of alleles) and B cell epitopes (Yes/No). For more information, please click |
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Protein | Neoepitopes | Tissue | Position | Prot Mutation | cDNA Mutation | Mutation Type | Num Mismatch | Promiscuity (%) | Cell Line | CTL | MHC I | NHLApred | MHC II | Bcell | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BRAF | ATPLPHYLA | ENDOMETRIUM | 400 | p.P403fs | c.1208_1208delC | Frame_Shift_Del | 6 | 0.22 | ISHIKAWAHERAKLIO02ER | N | 2 | 0 | 0 | N | ||||||||||||
BRAF | ATPLPHYLA | ENDOMETRIUM | 400 | p.P403fs | c.1208_1208delC | Frame_Shift_Del | 6 | 0.22 | RL952 | N | 2 | 0 | 0 | N | ||||||||||||
BRAF | LSATPLPHY | ENDOMETRIUM | 398 | p.P403fs | c.1208_1208delC | Frame_Shift_Del | 4 | 0.22 | ISHIKAWAHERAKLIO02ER | N | 8 | 0 | 0 | N | ||||||||||||
BRAF | LSATPLPHY | ENDOMETRIUM | 398 | p.P403fs | c.1208_1208delC | Frame_Shift_Del | 4 | 0.22 | RL952 | N | 8 | 0 | 0 | N | ||||||||||||
BRAF | SATPLPHYL | ENDOMETRIUM | 399 | p.P403fs | c.1208_1208delC | Frame_Shift_Del | 5 | 0.22 | ISHIKAWAHERAKLIO02ER | Y | 12 | 10 | 0 | N | ||||||||||||
BRAF | SATPLPHYL | ENDOMETRIUM | 399 | p.P403fs | c.1208_1208delC | Frame_Shift_Del | 5 | 0.22 | RL952 | Y | 12 | 10 | 0 | N | ||||||||||||
BRAF | TPLPHYLAH | ENDOMETRIUM | 401 | p.P403fs | c.1208_1208delC | Frame_Shift_Del | 6 | 0.22 | ISHIKAWAHERAKLIO02ER | N | 0 | 0 | 0 | N | ||||||||||||
BRAF | TPLPHYLAH | ENDOMETRIUM | 401 | p.P403fs | c.1208_1208delC | Frame_Shift_Del | 6 | 0.22 | RL952 | N | 0 | 0 | 0 | N | ||||||||||||