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The result page of search shows exclusive peptide/epitopes generated due to mutation [Neoepitope], the tissue of origin [Tissue], position of peptide in protein [Position], number of mismatches counted by aligning mutated and normal protein sequence [Num Mismatch, percentage of cell lines with this peptide over total number of cell lines [Promiscuity %]. The immune information include CTL epitopes (Yes/No), MHC I binders, MHC II binders (both given as number of alleles) and B cell epitopes (Yes/No). For more information, please click |
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Protein | Neoepitopes | Tissue | Position | Prot Mutation | cDNA Mutation | Mutation Type | Num Mismatch | Promiscuity (%) | Cell Line | CTL | MHC I | NHLApred | MHC II | Bcell | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VHL | DSLFLPISH | KIDNEY | 143 | p.V142fs | c.426_429delTGAC | Frame_Shift_Del | 6 | 0.11 | A498 | N | 1 | 0 | 0 | N | ||||||||||||
VHL | EIWKTTQMC | KIDNEY | 186 | p.E186fs | c.557_557delA | Frame_Shift_Del | 7 | 0.11 | TUHR10TKB | N | 1 | 0 | 0 | N | ||||||||||||
VHL | FLPISHCQC | KIDNEY | 146 | p.V142fs | c.426_429delTGAC | Frame_Shift_Del | 7 | 0.11 | A498 | N | 5 | 0 | 4 | N | ||||||||||||
VHL | IWKTTQMCR | KIDNEY | 187 | p.E186fs | c.557_557delA | Frame_Shift_Del | 7 | 0.11 | TUHR10TKB | N | 2 | 0 | 0 | N | ||||||||||||
VHL | KEMPPGCPE | KIDNEY | 159 | p.E160fs | c.480_481delGC | Frame_Shift_Del | 5 | 0.11 | VMRCRCW | N | 2 | 0 | 0 | N | ||||||||||||
VHL | KTTQMCRKT | KIDNEY | 189 | p.E186fs | c.557_557delA | Frame_Shift_Del | 7 | 0.11 | TUHR10TKB | N | 1 | 0 | 0 | N | ||||||||||||
VHL | LFLPISHCQ | KIDNEY | 145 | p.V142fs | c.426_429delTGAC | Frame_Shift_Del | 6 | 0.11 | A498 | N | 0 | 0 | 1 | N | ||||||||||||
VHL | LKEMPPGCP | KIDNEY | 158 | p.E160fs | c.480_481delGC | Frame_Shift_Del | 5 | 0.11 | VMRCRCW | N | 0 | 0 | 0 | N | ||||||||||||
VHL | LNVDSLFLP | KIDNEY | 140 | p.V142fs | c.426_429delTGAC | Frame_Shift_Del | 5 | 0.11 | A498 | N | 0 | 0 | 4 | N | ||||||||||||
VHL | LPISHCQCI | KIDNEY | 147 | p.V142fs | c.426_429delTGAC | Frame_Shift_Del | 6 | 0.11 | A498 | N | 14 | 0 | 4 | N | ||||||||||||
VHL | LYEIWKTTQ | KIDNEY | 184 | p.E186fs | c.557_557delA | Frame_Shift_Del | 6 | 0.11 | TUHR10TKB | N | 0 | 0 | 0 | N | ||||||||||||
VHL | MPPGCPEPS | KIDNEY | 161 | p.E160fs | c.480_481delGC | Frame_Shift_Del | 5 | 0.11 | VMRCRCW | N | 5 | 0 | 0 | N | ||||||||||||
VHL | NVDSLFLPI | KIDNEY | 141 | p.V142fs | c.426_429delTGAC | Frame_Shift_Del | 5 | 0.11 | A498 | N | 2 | 0 | 0 | N | ||||||||||||
VHL | PGCPEPSQA | KIDNEY | 163 | p.E160fs | c.480_481delGC | Frame_Shift_Del | 5 | 0.11 | VMRCRCW | N | 0 | 0 | 0 | N | ||||||||||||
VHL | PISHCQCIL | KIDNEY | 148 | p.V142fs | c.426_429delTGAC | Frame_Shift_Del | 7 | 0.11 | A498 | N | 0 | 0 | 0 | N | ||||||||||||
VHL | PPGCPEPSQ | KIDNEY | 162 | p.E160fs | c.480_481delGC | Frame_Shift_Del | 5 | 0.11 | VMRCRCW | N | 0 | 0 | 0 | N | ||||||||||||
VHL | QMCRKTWSG | KIDNEY | 192 | p.E186fs | c.557_557delA | Frame_Shift_Del | 7 | 0.11 | TUHR10TKB | N | 0 | 0 | 0 | N | ||||||||||||
VHL | SLFLPISHC | KIDNEY | 144 | p.V142fs | c.426_429delTGAC | Frame_Shift_Del | 6 | 0.11 | A498 | N | 5 | 0 | 0 | N | ||||||||||||
VHL | SLYEIWKTT | KIDNEY | 183 | p.E186fs | c.557_557delA | Frame_Shift_Del | 5 | 0.11 | TUHR10TKB | N | 4 | 0 | 0 | N | ||||||||||||
VHL | TLKEMPPGC | KIDNEY | 157 | p.E160fs | c.480_481delGC | Frame_Shift_Del | 5 | 0.11 | VMRCRCW | N | 2 | 0 | 0 | N | ||||||||||||
VHL | TQMCRKTWS | KIDNEY | 191 | p.E186fs | c.557_557delA | Frame_Shift_Del | 7 | 0.11 | TUHR10TKB | N | 0 | 0 | 0 | N | ||||||||||||
VHL | TTQMCRKTW | KIDNEY | 190 | p.E186fs | c.557_557delA | Frame_Shift_Del | 7 | 0.11 | TUHR10TKB | N | 1 | 0 | 0 | N | ||||||||||||
VHL | VDSLFLPIS | KIDNEY | 142 | p.V142fs | c.426_429delTGAC | Frame_Shift_Del | 5 | 0.11 | A498 | N | 1 | 0 | 0 | N | ||||||||||||
VHL | WKTTQMCRK | KIDNEY | 188 | p.E186fs | c.557_557delA | Frame_Shift_Del | 7 | 0.11 | TUHR10TKB | N | 3 | 0 | 2 | N | ||||||||||||
VHL | YEIWKTTQM | KIDNEY | 185 | p.E186fs | c.557_557delA | Frame_Shift_Del | 7 | 0.11 | TUHR10TKB | N | 10 | 0 | 15 | N | ||||||||||||