EbolaVCR: Computational resources for designing drugs and vaccines against EBOLA virus

Welcome to Home page of EbolaVCR

Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.

Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.

Strain	Gene	mRNA	siRNA	Position	Efficacy
Result
NC_004161.1	VP30	AAGACUUCUCACAAGGUAA	UUACCUUGUGAGAAGUCUU	395	1.100493
NC_004161.1	VP30	GGUAAUAGUCCUAAAUUAA	UUAAUUUAGGACUAUUACC	409	1.096527
NC_004161.1	VP30	GACCGACAGUCAUUAAUAA	UUAUUAAUGACUGUCGGUC	691	1.082217
NC_004161.1	VP30	GCAAAUUGAGGACUCUAAA	UUUAGAGUCCUCAAUUUGC	480	1.058774
NC_004161.1	VP30	CUAGCAACAUGCGACAUAA	UUAUGUCGCAUGUUGCUAG	29	1.057209
NC_004161.1	VP30	GGCAAAUUGAGGACUCUAA	UUAGAGUCCUCAAUUUGCC	479	1.056885
NC_004161.1	VP30	GACAGUCAUUAAUAAUGUU	AACAUUAUUAAUGACUGUC	695	1.054975
NC_004161.1	VP30	GAAGACUUCUCACAAGGUA	UACCUUGUGAGAAGUCUUC	394	1.050198
NC_004161.1	VP30	CACCAAUUGGAUAGCUUAA	UUAAGCUAUCCAAUUGGUG	268	1.048739
NC_004161.1	VP30	GGACCAAGCUGAUUCUGUA	UACAGAAUCAGCUUGGUCC	603	1.044797
NC_004161.1	VP30	GCUAAUUGCAAGAAGAACA	UGUUCUUCUUGCAAUUAGC	306	1.034989
NC_004161.1	VP30	ACAAGGUAAUAGUCCUAAA	UUUAGGACUAUUACCUUGU	405	1.033485
NC_004161.1	VP30	AGGUAAUAGUCCUAAAUUA	UAAUUUAGGACUAUUACCU	408	1.027833
NC_004161.1	VP30	CCUCUGCGAUAGCAAAUUU	AAAUUUGCUAUCGCAGAGG	237	1.024995
NC_004161.1	VP30	GGACCGACAGUCAUUAAUA	UAUUAAUGACUGUCGGUCC	690	1.023455
NC_004161.1	VP30	ACUGCUAAUUGCAAGAAGA	UCUUCUUGCAAUUAGCAGU	303	1.020419
NC_004161.1	VP30	CGACAGUCAUUAAUAAUGU	ACAUUAUUAAUGACUGUCG	694	1.016027
NC_004161.1	VP30	GAUUCCUCUGCGAUAGCAA	UUGCUAUCGCAGAGGAAUC	233	1.015768
NC_004161.1	VP30	CCAGCACAAGACAAUUCUA	UAGAAUUGUCUUGUGCUGG	796	1.010623
NC_004161.1	VP30	GUAUUAGAGGUCUACCAAA	UUUGGUAGACCUCUAAUAC	619	1.008148
NC_004161.1	VP30	CAGUCAUUAAUAAUGUUCA	UGAACAUUAUUAAUGACUG	697	1.000218
NC_004161.1	VP30	AGACUUCUCACAAGGUAAU	AUUACCUUGUGAGAAGUCU	396	0.997308
NC_004161.1	VP30	GACUUCUCACAAGGUAAUA	UAUUACCUUGUGAGAAGUC	397	0.993664
NC_004161.1	VP30	CUGCUAAUUGCAAGAAGAA	UUCUUCUUGCAAUUAGCAG	304	0.993292
NC_004161.1	VP30	CUCUGCGAUAGCAAAUUUU	AAAAUUUGCUAUCGCAGAG	238	0.988624
NC_004161.1	VP30	CAAAGACUCCACAGUGAUA	UAUCACUGUGGAGUCUUUG	634	0.987280
NC_004161.1	VP30	AGCUGAAGACUUCUCACAA	UUGUGAGAAGUCUUCAGCU	390	0.986180
NC_004161.1	VP30	CGAUAGCAAAUUUUGCAAA	UUUGCAAAAUUUGCUAUCG	243	0.977329
NC_004161.1	VP30	GCGAUAGCAAAUUUUGCAA	UUGCAAAAUUUGCUAUCGC	242	0.977248
NC_004161.1	VP30	UCACCAAUUGGAUAGCUUA	UAAGCUAUCCAAUUGGUGA	267	0.973586
NC_004161.1	VP30	CAUGAAUUACUACUGCUAA	UUAGCAGUAGUAAUUCAUG	292	0.972877
NC_004161.1	VP30	AAGACUCCACAGUGAUAAA	UUUAUCACUGUGGAGUCUU	636	0.971402
NC_004161.1	VP30	GGAUAGCUUAAAUGAUCAU	AUGAUCAUUUAAGCUAUCC	276	0.969491
NC_004161.1	VP30	GCAAAUUUUGCAAAAAAGA	UCUUUUUUGCAAAAUUUGC	248	0.963078
NC_004161.1	VP30	CACAAGGUAAUAGUCCUAA	UUAGGACUAUUACCUUGUG	404	0.961696
NC_004161.1	VP30	CAACAUUGCUCUCCAGAUA	UAUCUGGAGAGCAAUGUUG	729	0.960608
NC_004161.1	VP30	AGAGCUCUUUUAACCCUUU	AAAGGGUUAAAAGAGCUCU	502	0.957344
NC_004161.1	VP30	GCGGUUAGCGAAUCCAACA	UGUUGGAUUCGCUAACCGC	372	0.956022
NC_004161.1	VP30	UGUAUUAGAGGUCUACCAA	UUGGUAGACCUCUAAUACA	618	0.955795
NC_004161.1	VP30	CAUUGUACCCAGCACAAGA	UCUUGUGCUGGGUACAAUG	788	0.955358
NC_004161.1	VP30	CCAACACUCAAAAAAGGAU	AUCCUUUUUUGAGUGUUGG	217	0.955335
NC_004161.1	VP30	AUGCGGUUAGCGAAUCCAA	UUGGAUUCGCUAACCGCAU	370	0.954306
NC_004161.1	VP30	GCAAGAAGAACAUGUGGAA	UUCCACAUGUUCUUCUUGC	313	0.952759
NC_004161.1	VP30	AGUCAUUAAUAAUGUUCAU	AUGAACAUUAUUAAUGACU	698	0.951986
NC_004161.1	VP30	GAGAGCAAUUCGCAGAUUA	UAAUCUGCGAAUUGCUCUC	337	0.951671
NC_004161.1	VP30	AGCACAAGACAAUUCUACA	UGUAGAAUUGUCUUGUGCU	798	0.951359
NC_004161.1	VP30	CAAGGUAAUAGUCCUAAAU	AUUUAGGACUAUUACCUUG	406	0.948245
NC_004161.1	VP30	CAAUGGGACCGACAGUCAU	AUGACUGUCGGUCCCAUUG	685	0.947796
NC_004161.1	VP30	AGAUAUGCGGUUAGCGAAU	AUUCGCUAACCGCAUAUCU	366	0.945331
NC_004161.1	VP30	AUUCCUCUGCGAUAGCAAA	UUUGCUAUCGCAGAGGAAU	234	0.945075
NC_004161.1	VP30	AGCAACAUGCGACAUAAUA	UAUUAUGUCGCAUGUUGCU	31	0.944177
NC_004161.1	VP30	CUCACAAGGUAAUAGUCCU	AGGACUAUUACCUUGUGAG	402	0.943760
NC_004161.1	VP30	GACCAAGCUGAUUCUGUAU	AUACAGAAUCAGCUUGGUC	604	0.942809
NC_004161.1	VP30	CUGUAUUAGAGGUCUACCA	UGGUAGACCUCUAAUACAG	617	0.942592
NC_004161.1	VP30	GAAUCUGUUCCAUCGGAAA	UUUCCGAUGGAACAGAUUC	153	0.942444
NC_004161.1	VP30	CAGAUACCUUGUGAAAGUU	AACUUUCACAAGGUAUCUG	742	0.939755
NC_004161.1	VP30	UGAGGACUCUAAACUUAGA	UCUAAGUUUAGAGUCCUCA	486	0.937941
NC_004161.1	VP30	AUUCUGUAUUAGAGGUCUA	UAGACCUCUAAUACAGAAU	614	0.936077
NC_004161.1	VP30	UCACAAGGUAAUAGUCCUA	UAGGACUAUUACCUUGUGA	403	0.935669
NC_004161.1	VP30	CUCCAGAUACCUUGUGAAA	UUUCACAAGGUAUCUGGAG	739	0.935520
NC_004161.1	VP30	GAUACCUUGUGAAAGUUCU	AGAACUUUCACAAGGUAUC	744	0.934930
NC_004161.1	VP30	GGAAAAAGACUGAUGCACU	AGUGCAUCAGUCUUUUUCC	167	0.934654
NC_004161.1	VP30	GGUUGAUCGUAGACAGCCU	AGGCUGUCUACGAUCAACC	108	0.932534
NC_004161.1	VP30	AGGUCUACCAAAGACUCCA	UGGAGUCUUUGGUAGACCU	626	0.931041
NC_004161.1	VP30	GGGACCGACAGUCAUUAAU	AUUAAUGACUGUCGGUCCC	689	0.930734
NC_004161.1	VP30	AGGCAAAUUGAGGACUCUA	UAGAGUCCUCAAUUUGCCU	478	0.929534
NC_004161.1	VP30	ACCGACAGUCAUUAAUAAU	AUUAUUAAUGACUGUCGGU	692	0.928418
NC_004161.1	VP30	AAAGACUGAUGCACUCAUA	UAUGAGUGCAUCAGUCUUU	171	0.926216
NC_004161.1	VP30	AUAUAUGCCCAACACUCAA	UUGAGUGUUGGGCAUAUAU	209	0.925926
NC_004161.1	VP30	AUACCUUGUGAAAGUUCUA	UAGAACUUUCACAAGGUAU	745	0.924920
NC_004161.1	VP30	AAGAUAUGCGGUUAGCGAA	UUCGCUAACCGCAUAUCUU	365	0.924456
NC_004161.1	VP30	CACAUUGUACCCAGCACAA	UUGUGCUGGGUACAAUGUG	786	0.924364
NC_004161.1	VP30	CUCUCCAGAUACCUUGUGA	UCACAAGGUAUCUGGAGAG	737	0.923532
NC_004161.1	VP30	CCAAAGACUCCACAGUGAU	AUCACUGUGGAGUCUUUGG	633	0.922382
NC_004161.1	VP30	GUGCCGUAUUAACAAGGAA	UUCCUUGUUAAUACGGCAC	521	0.922209
NC_004161.1	VP30	GCGACAUAAUAGCCGGGAA	UUCCCGGCUAUUAUGUCGC	39	0.921538
NC_004161.1	VP30	GAUCUAGCAACAUGCGACA	UGUCGCAUGUUGCUAGAUC	26	0.921288
NC_004161.1	VP30	CUAAUUGCAAGAAGAACAU	AUGUUCUUCUUGCAAUUAG	307	0.920019
NC_004161.1	VP30	CGAAUCUGUUCCAUCGGAA	UUCCGAUGGAACAGAUUCG	152	0.919852
NC_004161.1	VP30	AUUGAGGACUCUAAACUUA	UAAGUUUAGAGUCCUCAAU	484	0.919727
NC_004161.1	VP30	GACUGAUGCACUCAUAGUU	AACUAUGAGUGCAUCAGUC	174	0.919350
NC_004161.1	VP30	UCAAGGUCUCGCUCAUUAU	AUAAUGAGCGAGACCUUGA	73	0.918311
NC_004161.1	VP30	CUCUAAACUUAGAGCUCUU	AAGAGCUCUAAGUUUAGAG	492	0.918051
NC_004161.1	VP30	GCUGAAGACUUCUCACAAG	CUUGUGAGAAGUCUUCAGC	391	0.914091
NC_004161.1	VP30	GAUAUAUGCCCAACACUCA	UGAGUGUUGGGCAUAUAUC	208	0.914070
NC_004161.1	VP30	CGGGGUAGAUCUAGCAACA	UGUUGCUAGAUCUACCCCG	19	0.913463
NC_004161.1	VP30	GCCUCGAAGUGCAUCCCAA	UUGGGAUGCACUUCGAGGC	123	0.913255
NC_004161.1	VP30	AAAGGAUUCCUCUGCGAUA	UAUCGCAGAGGAAUCCUUU	229	0.912010
NC_004161.1	VP30	AGCGAAUCCAACAGCUGAA	UUCAGCUGUUGGAUUCGCU	378	0.910742
NC_004161.1	VP30	UGGGACCGACAGUCAUUAA	UUAAUGACUGUCGGUCCCA	688	0.910716
NC_004161.1	VP30	ACUCCACAGUGAUAAAGGA	UCCUUUAUCACUGUGGAGU	639	0.908856
NC_004161.1	VP30	CCAAUUGGAUAGCUUAAAU	AUUUAAGCUAUCCAAUUGG	270	0.908434
NC_004161.1	VP30	CGAAAAUCCAUCAAGGUCU	AGACCUUGAUGGAUUUUCG	63	0.907749
NC_004161.1	VP30	CAAGACAAUUCUACACCAU	AUGGUGUAGAAUUGUCUUG	802	0.907488
NC_004161.1	VP30	CCUCGAAGUGCAUCCCAAA	UUUGGGAUGCACUUCGAGG	124	0.907040
NC_004161.1	VP30	CCUCCGGCUCCUAAAGAUA	UAUCUUUAGGAGCCGGAGG	193	0.906189
NC_004161.1	VP30	GAUUCUGUAUUAGAGGUCU	AGACCUCUAAUACAGAAUC	613	0.905599
NC_004161.1	VP30	CCGGCUCCUAAAGAUAUAU	AUAUAUCUUUAGGAGCCGG	196	0.904698
NC_004161.1	VP30	CCACAUUGUACCCAGCACA	UGUGCUGGGUACAAUGUGG	785	0.902057
NC_004161.1	VP30	CUACUGCUAAUUGCAAGAA	UUCUUGCAAUUAGCAGUAG	301	0.901753
NC_004161.1	VP30	GCAACAUGCGACAUAAUAG	CUAUUAUGUCGCAUGUUGC	32	0.900950
NC_004161.1	VP30	CAAAUUUUGCAAAAAAGAU	AUCUUUUUUGCAAAAUUUG	249	0.899938
NC_004161.1	VP30	ACUACUGCUAAUUGCAAGA	UCUUGCAAUUAGCAGUAGU	300	0.898996
NC_004161.1	VP30	ACCAAAGACUCCACAGUGA	UCACUGUGGAGUCUUUGGU	632	0.898591
NC_004161.1	VP30	CGAAUCCAACAGCUGAAGA	UCUUCAGCUGUUGGAUUCG	380	0.897198
NC_004161.1	VP30	UCAUGAAUUACUACUGCUA	UAGCAGUAGUAAUUCAUGA	291	0.897010
NC_004161.1	VP30	CGGACAGGACCAAGCUGAU	AUCAGCUUGGUCCUGUCCG	597	0.896679
NC_004161.1	VP30	GGACAGGACCAAGCUGAUU	AAUCAGCUUGGUCCUGUCC	598	0.894474
NC_004161.1	VP30	AAACUUAGAGCUCUUUUAA	UUAAAAGAGCUCUAAGUUU	496	0.894278
NC_004161.1	VP30	UAGCAACAUGCGACAUAAU	AUUAUGUCGCAUGUUGCUA	30	0.894159
NC_004161.1	VP30	CUCCGGCUCCUAAAGAUAU	AUAUCUUUAGGAGCCGGAG	194	0.893126
NC_004161.1	VP30	CAUCCGAGGCAACUAAUGA	UCAUUAGUUGCCUCGGAUG	818	0.892261
NC_004161.1	VP30	GGAUUCCUCUGCGAUAGCA	UGCUAUCGCAGAGGAAUCC	232	0.891772
NC_004161.1	VP30	CGGUUAGCGAAUCCAACAG	CUGUUGGAUUCGCUAACCG	373	0.891446
NC_004161.1	VP30	AGAGAACGGGGUAGAUCUA	UAGAUCUACCCCGUUCUCU	13	0.891256
NC_004161.1	VP30	AGCAAUUCGCAGAUUACAU	AUGUAAUCUGCGAAUUGCU	340	0.890796
NC_004161.1	VP30	AGACAGCCUCGAAGUGCAU	AUGCACUUCGAGGCUGUCU	118	0.889891
NC_004161.1	VP30	CAGCUGAAGACUUCUCACA	UGUGAGAAGUCUUCAGCUG	389	0.889749
NC_004161.1	VP30	UAGCGAAUCCAACAGCUGA	UCAGCUGUUGGAUUCGCUA	377	0.889697
NC_004161.1	VP30	ACAAGACAAUUCUACACCA	UGGUGUAGAAUUGUCUUGU	801	0.888629
NC_004161.1	VP30	UGUACCCAGCACAAGACAA	UUGUCUUGUGCUGGGUACA	791	0.885375
NC_004161.1	VP30	GAGCAAUUCGCAGAUUACA	UGUAAUCUGCGAAUUGCUC	339	0.884145
NC_004161.1	VP30	ACAAUGGGACCGACAGUCA	UGACUGUCGGUCCCAUUGU	684	0.883012
NC_004161.1	VP30	UCCGGCUCCUAAAGAUAUA	UAUAUCUUUAGGAGCCGGA	195	0.882658
NC_004161.1	VP30	AAUUGAGGACUCUAAACUU	AAGUUUAGAGUCCUCAAUU	483	0.882636
NC_004161.1	VP30	AUCAAGGUCUCGCUCAUUA	UAAUGAGCGAGACCUUGAU	72	0.880888
NC_004161.1	VP30	GAUAGCAAAUUUUGCAAAA	UUUUGCAAAAUUUGCUAUC	244	0.880216
NC_004161.1	VP30	CGAGAGCAAUUCGCAGAUU	AAUCUGCGAAUUGCUCUCG	336	0.879433
NC_004161.1	VP30	AGUUCCUCCGGCUCCUAAA	UUUAGGAGCCGGAGGAACU	189	0.878863
NC_004161.1	VP30	CCAUCAAGGUCUCGCUCAU	AUGAGCGAGACCUUGAUGG	70	0.878451
NC_004161.1	VP30	UAGAGCUCUUUUAACCCUU	AAGGGUUAAAAGAGCUCUA	501	0.876494
NC_004161.1	VP30	GAUCGUAGACAGCCUCGAA	UUCGAGGCUGUCUACGAUC	112	0.875406
NC_004161.1	VP30	CCUAAAGAUAUAUGCCCAA	UUGGGCAUAUAUCUUUAGG	202	0.874685
NC_004161.1	VP30	CCAUCGGAAAAAGACUGAU	AUCAGUCUUUUUCCGAUGG	162	0.873960
NC_004161.1	VP30	CCCAAAAGAUAUGCGGUUA	UAACCGCAUAUCUUUUGGG	360	0.873222
NC_004161.1	VP30	UAAACUUAGAGCUCUUUUA	UAAAAGAGCUCUAAGUUUA	495	0.872585
NC_004161.1	VP30	UCAUUAUCUCGGGACCCUA	UAGGGUCCCGAGAUAAUGA	85	0.871482
NC_004161.1	VP30	GAACGGGGUAGAUCUAGCA	UGCUAGAUCUACCCCGUUC	16	0.871222
NC_004161.1	VP30	CUAAACUUAGAGCUCUUUU	AAAAGAGCUCUAAGUUUAG	494	0.870628
NC_004161.1	VP30	GAGCUCUUUUAACCCUUUG	CAAAGGGUUAAAAGAGCUC	503	0.870302
NC_004161.1	VP30	GUUCCAUCGGAAAAAGACU	AGUCUUUUUCCGAUGGAAC	159	0.870172
NC_004161.1	VP30	CUGUUCCAUCGGAAAAAGA	UCUUUUUCCGAUGGAACAG	157	0.867901
NC_004161.1	VP30	UAGCUUAAAUGAUCAUGAA	UUCAUGAUCAUUUAAGCUA	279	0.866741
NC_004161.1	VP30	AAUUGGAUAGCUUAAAUGA	UCAUUUAAGCUAUCCAAUU	272	0.866687
NC_004161.1	VP30	UAGUUCCUCCGGCUCCUAA	UUAGGAGCCGGAGGAACUA	188	0.865947
NC_004161.1	VP30	GAGGCAACUAAUGAUACCA	UGGUAUCAUUAGUUGCCUC	823	0.865623
NC_004161.1	VP30	UGGAUAGCUUAAAUGAUCA	UGAUCAUUUAAGCUAUCCA	275	0.865484
NC_004161.1	VP30	AGCUCUUUUAACCCUUUGU	ACAAAGGGUUAAAAGAGCU	504	0.864090
NC_004161.1	VP30	CAUUCAAGAGAACGGGGUA	UACCCCGUUCUCUUGAAUG	7	0.862048
NC_004161.1	VP30	CCAACAGCUGAAGACUUCU	AGAAGUCUUCAGCUGUUGG	385	0.860859
NC_004161.1	VP30	CAGGUCUUGCCACAUUGUA	UACAAUGUGGCAAGACCUG	776	0.858680
NC_004161.1	VP30	AAAUGAUCAUGAAUUACUA	UAGUAAUUCAUGAUCAUUU	285	0.857341
NC_004161.1	VP30	AGCUUAAAUGAUCAUGAAU	AUUCAUGAUCAUUUAAGCU	280	0.857324
NC_004161.1	VP30	CACAGUGAUAAAGGAGGGA	UCCCUCCUUUAUCACUGUG	643	0.855841
NC_004161.1	VP30	CUUCUCACAAGGUAAUAGU	ACUAUUACCUUGUGAGAAG	399	0.855482
NC_004161.1	VP30	CAACCAGAGACCUAAGGCA	UGCCUUAGGUCUCUGGUUG	464	0.855418
NC_004161.1	VP30	UAAUCAGGUUGAUCGUAGA	UCUACGAUCAACCUGAUUA	102	0.854962
NC_004161.1	VP30	AUUGCUCUCCAGAUACCUU	AAGGUAUCUGGAGAGCAAU	733	0.853918
NC_004161.1	VP30	GUACCCAGCACAAGACAAU	AUUGUCUUGUGCUGGGUAC	792	0.852619
NC_004161.1	VP30	UGCGAUAGCAAAUUUUGCA	UGCAAAAUUUGCUAUCGCA	241	0.852416
NC_004161.1	VP30	CUUUGUGCCGUAUUAACAA	UUGUUAAUACGGCACAAAG	517	0.851771
NC_004161.1	VP30	CCAGAUACCUUGUGAAAGU	ACUUUCACAAGGUAUCUGG	741	0.851205
NC_004161.1	VP30	GCAAAAAAGAUCACCAAUU	AAUUGGUGAUCUUUUUUGC	257	0.851014
NC_004161.1	VP30	AAAAAGACUGAUGCACUCA	UGAGUGCAUCAGUCUUUUU	169	0.850614
NC_004161.1	VP30	UGUCGUAGUCUCAGGUCUU	AAGACCUGAGACUACGACA	765	0.850342
NC_004161.1	VP30	AAAGACUCCACAGUGAUAA	UUAUCACUGUGGAGUCUUU	635	0.849702
NC_004161.1	VP30	GUCUACCAAAGACUCCACA	UGUGGAGUCUUUGGUAGAC	628	0.849571
NC_004161.1	VP30	CCCAACACUCAAAAAAGGA	UCCUUUUUUGAGUGUUGGG	216	0.849118
NC_004161.1	VP30	UCCGAGGCAACUAAUGAUA	UAUCAUUAGUUGCCUCGGA	820	0.849065
NC_004161.1	VP30	ACCAAUUGGAUAGCUUAAA	UUUAAGCUAUCCAAUUGGU	269	0.848919
NC_004161.1	VP30	CCGAAUCUGUUCCAUCGGA	UCCGAUGGAACAGAUUCGG	151	0.847887
NC_004161.1	VP30	AUUACUACUGCUAAUUGCA	UGCAAUUAGCAGUAGUAAU	297	0.847408
NC_004161.1	VP30	AAAGAUCACCAAUUGGAUA	UAUCCAAUUGGUGAUCUUU	262	0.846439
NC_004161.1	VP30	AAAAAGAUCACCAAUUGGA	UCCAAUUGGUGAUCUUUUU	260	0.845858
NC_004161.1	VP30	AGACUGAUGCACUCAUAGU	ACUAUGAGUGCAUCAGUCU	173	0.844117
NC_004161.1	VP30	CCCAGCACAAGACAAUUCU	AGAAUUGUCUUGUGCUGGG	795	0.843843
NC_004161.1	VP30	AUUAGAGGUCUACCAAAGA	UCUUUGGUAGACCUCUAAU	621	0.843212
NC_004161.1	VP30	AAAAAGGAUUCCUCUGCGA	UCGCAGAGGAAUCCUUUUU	227	0.842334
NC_004161.1	VP30	AUCACCAAUUGGAUAGCUU	AAGCUAUCCAAUUGGUGAU	266	0.841583
NC_004161.1	VP30	GGUCUACCAAAGACUCCAC	GUGGAGUCUUUGGUAGACC	627	0.840211
NC_004161.1	VP30	UAGAGGUCUACCAAAGACU	AGUCUUUGGUAGACCUCUA	623	0.839846
NC_004161.1	VP30	UAAUAGUCCUAAAUUAACA	UGUUAAUUUAGGACUAUUA	411	0.839631
NC_004161.1	VP30	UGCAAGAAGAACAUGUGGA	UCCACAUGUUCUUCUUGCA	312	0.839522
NC_004161.1	VP30	CUCUGCUUUUCUCAACAUU	AAUGUUGAGAAAAGCAGAG	717	0.838986
NC_004161.1	VP30	CUCAAAAAAGGAUUCCUCU	AGAGGAAUCCUUUUUUGAG	223	0.838524
NC_004161.1	VP30	CUUAAAUGAUCAUGAAUUA	UAAUUCAUGAUCAUUUAAG	282	0.838025
NC_004161.1	VP30	UAUGCGGUUAGCGAAUCCA	UGGAUUCGCUAACCGCAUA	369	0.837638
NC_004161.1	VP30	CGUAUUAACAAGGAAAUUU	AAAUUUCCUUGUUAAUACG	525	0.836145
NC_004161.1	VP30	GGGGUAGAUCUAGCAACAU	AUGUUGCUAGAUCUACCCC	20	0.834782
NC_004161.1	VP30	CCGACAGUCAUUAAUAAUG	CAUUAUUAAUGACUGUCGG	693	0.834471
NC_004161.1	VP30	AGAGGUCUACCAAAGACUC	GAGUCUUUGGUAGACCUCU	624	0.833699
NC_004161.1	VP30	AAAGAUAUGCGGUUAGCGA	UCGCUAACCGCAUAUCUUU	364	0.833503
NC_004161.1	VP30	UCAUCUCUGCUUUUCUCAA	UUGAGAAAAGCAGAGAUGA	713	0.832069
NC_004161.1	VP30	GGGUAGAUCUAGCAACAUG	CAUGUUGCUAGAUCUACCC	21	0.829012
NC_004161.1	VP30	UCGGAAAAAGACUGAUGCA	UGCAUCAGUCUUUUUCCGA	165	0.827725
NC_004161.1	VP30	CAACAAUGGGACCGACAGU	ACUGUCGGUCCCAUUGUUG	682	0.826562
NC_004161.1	VP30	AUGAAUUACUACUGCUAAU	AUUAGCAGUAGUAAUUCAU	293	0.825405
NC_004161.1	VP30	UGCCGUAUUAACAAGGAAA	UUUCCUUGUUAAUACGGCA	522	0.825363
NC_004161.1	VP30	GUUAGCGAAUCCAACAGCU	AGCUGUUGGAUUCGCUAAC	375	0.824887
NC_004161.1	VP30	UAGACAGCCUCGAAGUGCA	UGCACUUCGAGGCUGUCUA	117	0.823599
NC_004161.1	VP30	UGCUCUCCAGAUACCUUGU	ACAAGGUAUCUGGAGAGCA	735	0.823487
NC_004161.1	VP30	AAAAGACUGAUGCACUCAU	AUGAGUGCAUCAGUCUUUU	170	0.822409
NC_004161.1	VP30	UUACUACUGCUAAUUGCAA	UUGCAAUUAGCAGUAGUAA	298	0.822373
NC_004161.1	VP30	AACAGCUGAAGACUUCUCA	UGAGAAGUCUUCAGCUGUU	387	0.819797
NC_004161.1	VP30	CGGAAAAAGACUGAUGCAC	GUGCAUCAGUCUUUUUCCG	166	0.819552
NC_004161.1	VP30	GCAACUAAUGAUACCACCU	AGGUGGUAUCAUUAGUUGC	826	0.819188
NC_004161.1	VP30	UAAUGUUCAUCUCUGCUUU	AAAGCAGAGAUGAACAUUA	707	0.818704
NC_004161.1	VP30	AACGGGGUAGAUCUAGCAA	UUGCUAGAUCUACCCCGUU	17	0.817764
NC_004161.1	VP30	GGCAACAAUGGGACCGACA	UGUCGGUCCCAUUGUUGCC	680	0.817547
NC_004161.1	VP30	AGGACCAAGCUGAUUCUGU	ACAGAAUCAGCUUGGUCCU	602	0.817393
NC_004161.1	VP30	AUUGGAUAGCUUAAAUGAU	AUCAUUUAAGCUAUCCAAU	273	0.816432
NC_004161.1	VP30	AAGGCAAAUUGAGGACUCU	AGAGUCCUCAAUUUGCCUU	477	0.815303
NC_004161.1	VP30	UCUCCAGAUACCUUGUGAA	UUCACAAGGUAUCUGGAGA	738	0.814026
NC_004161.1	VP30	GUGUCGUAGUCUCAGGUCU	AGACCUGAGACUACGACAC	764	0.812317
NC_004161.1	VP30	AGAGCAAUUCGCAGAUUAC	GUAAUCUGCGAAUUGCUCU	338	0.812196
NC_004161.1	VP30	UGCAAAAAAGAUCACCAAU	AUUGGUGAUCUUUUUUGCA	256	0.812042
NC_004161.1	VP30	GAAAAAGACUGAUGCACUC	GAGUGCAUCAGUCUUUUUC	168	0.808891
NC_004161.1	VP30	GCACAAGACAAUUCUACAC	GUGUAGAAUUGUCUUGUGC	799	0.808842
NC_004161.1	VP30	GAAUUACUACUGCUAAUUG	CAAUUAGCAGUAGUAAUUC	295	0.808619
NC_004161.1	VP30	AGUCUCAGGUCUUGCCACA	UGUGGCAAGACCUGAGACU	771	0.807584
NC_004161.1	VP30	GGGCAACCAGAGACCUAAG	CUUAGGUCUCUGGUUGCCC	461	0.806619
NC_004161.1	VP30	AAAAGAUCACCAAUUGGAU	AUCCAAUUGGUGAUCUUUU	261	0.806504
NC_004161.1	VP30	CCUUGUGAAAGUUCUAGUG	CACUAGAACUUUCACAAGG	748	0.806108
NC_004161.1	VP30	ACCUUGUGAAAGUUCUAGU	ACUAGAACUUUCACAAGGU	747	0.806008
NC_004161.1	VP30	CCUUUGUGCCGUAUUAACA	UGUUAAUACGGCACAAAGG	516	0.804952
NC_004161.1	VP30	CAUUAAUAAUGUUCAUCUC	GAGAUGAACAUUAUUAAUG	701	0.804710
NC_004161.1	VP30	GCAACAAUGGGACCGACAG	CUGUCGGUCCCAUUGUUGC	681	0.804656
NC_004161.1	VP30	UAGAUCUAGCAACAUGCGA	UCGCAUGUUGCUAGAUCUA	24	0.802797
NC_004161.1	VP30	CUCGAAGUGCAUCCCAAAU	AUUUGGGAUGCACUUCGAG	125	0.802548
NC_004161.1	VP30	AAAAGGAUUCCUCUGCGAU	AUCGCAGAGGAAUCCUUUU	228	0.802038
NC_004161.1	VP30	AAUGGGACCGACAGUCAUU	AAUGACUGUCGGUCCCAUU	686	0.801792
NC_004161.1	VP30	UAGCAAAUUUUGCAAAAAA	UUUUUUGCAAAAUUUGCUA	246	0.801428
NC_004161.1	VP30	CGAAGUGCAUCCCAAAUUC	GAAUUUGGGAUGCACUUCG	127	0.800932
NC_004161.1	VP30	UCUGCGAUAGCAAAUUUUG	CAAAAUUUGCUAUCGCAGA	239	0.800765

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