EbolaVCR: Computational resources for designing drugs and vaccines against EBOLA virus

Welcome to Home page of EbolaVCR

Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.

Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.

Strain	Gene	mRNA	siRNA	Position	Efficacy
Result
NC_002549.1	VP24	CGACACGAAUGCAAAGUUU	AAACUUUGCAUUCGUGUCG	704	1.137722
NC_002549.1	VP24	GAUGUGACUCACAAAGGAA	UUCCUUUGUGAGUCACAUC	142	1.110742
NC_002549.1	VP24	GAAUCUCUUUCCUCAUUUA	UAAAUGAGGAAAGAGAUUC	219	1.103698
NC_002549.1	VP24	AGUUUGAUGUGACUCACAA	UUGUGAGUCACAUCAAACU	137	1.097074
NC_002549.1	VP24	CGACCUCUGUAACUUCUUA	UAAGAAGUUACAGAGGUCG	72	1.084534
NC_002549.1	VP24	GUUUGAUGUGACUCACAAA	UUUGUGAGUCACAUCAAAC	138	1.061108
NC_002549.1	VP24	GGACGAUACAAUCUAAUAU	AUAUUAGAUUGUAUCGUCC	16	1.060196
NC_002549.1	VP24	ACGGGACGAUACAAUCUAA	UUAGAUUGUAUCGUCCCGU	13	1.055782
NC_002549.1	VP24	GGGACGAUACAAUCUAAUA	UAUUAGAUUGUAUCGUCCC	15	1.030156
NC_002549.1	VP24	CGAAAUUUUCCCUCCUUCA	UGAAGGAGGGAAAAUUUCG	650	1.028097
NC_002549.1	VP24	CCUAUUGCAUAGACUGAAA	UUUCAGUCUAUGCAAUAGG	165	1.024315
NC_002549.1	VP24	CAUGGUCAAUGACAAGGAA	UUCCUUGUCAUUGACCAUG	203	1.020175
NC_002549.1	VP24	CGUUGAUUCGAUCCAAUAU	AUAUUGGAUCGAAUCAACG	452	1.013424
NC_002549.1	VP24	CUCUGUAACUUCUUAGUUA	UAACUAAGAAGUUACAGAG	76	1.006646
NC_002549.1	VP24	CGGAUUGUUGAGCAGUAUU	AAUACUGCUCAACAAUCCG	519	1.005707
NC_002549.1	VP24	AACACAACGUGUCAAGGAA	UUCCUUGACACGUUGUGUU	411	1.002637
NC_002549.1	VP24	CGUGUCAAGGAACAAUUGA	UCAAUUGUUCCUUGACACG	418	1.000400
NC_002549.1	VP24	CAACGUGUCAAGGAACAAU	AUUGUUCCUUGACACGUUG	415	1.000054
NC_002549.1	VP24	GGUUGUCUUAAGCGACCUC	GAGGUCGCUUAAGACAACC	60	0.998640
NC_002549.1	VP24	GUCUUAAGCGACCUCUGUA	UACAGAGGUCGCUUAAGAC	64	0.992808
NC_002549.1	VP24	UGCAUAGACUGAAAACUAA	UUAGUUUUCAGUCUAUGCA	170	0.988782
NC_002549.1	VP24	ACACGAAUGCAAAGUUUGA	UCAAACUUUGCAUUCGUGU	706	0.984079
NC_002549.1	VP24	UCCUCGACACGAAUGCAAA	UUUGCAUUCGUGUCGAGGA	700	0.980553
NC_002549.1	VP24	GCAUGGUCAAUGACAAGGA	UCCUUGUCAUUGACCAUGC	202	0.978912
NC_002549.1	VP24	CAAUAUUCUCAAGUUUAUU	AAUAAACUUGAGAAUAUUG	465	0.976301
NC_002549.1	VP24	GCUCCAAGAACCCGACAAA	UUUGUCGGGUUCUUGGAGC	600	0.975754
NC_002549.1	VP24	CACAACGUGUCAAGGAACA	UGUUCCUUGACACGUUGUG	413	0.974731
NC_002549.1	VP24	UGAUGUGACUCACAAAGGA	UCCUUUGUGAGUCACAUCA	141	0.972977
NC_002549.1	VP24	CGGGACGAUACAAUCUAAU	AUUAGAUUGUAUCGUCCCG	14	0.970646
NC_002549.1	VP24	GACACGAAUGCAAAGUUUG	CAAACUUUGCAUUCGUGUC	705	0.970248
NC_002549.1	VP24	CAAUGACAAGGAAUCUCUU	AAGAGAUUCCUUGUCAUUG	209	0.970079
NC_002549.1	VP24	CAAAUUGGAUGCUCUACAU	AUGUAGAGCAUCCAAUUUG	486	0.966960
NC_002549.1	VP24	GAGUUUGAUGUGACUCACA	UGUGAGUCACAUCAAACUC	136	0.965907
NC_002549.1	VP24	GCAAAGUUUGAUUCUUGAA	UUCAAGAAUCAAACUUUGC	714	0.965763
NC_002549.1	VP24	ACAACGUGUCAAGGAACAA	UUGUUCCUUGACACGUUGU	414	0.964397
NC_002549.1	VP24	GGCGAAAUUUUCCCUCCUU	AAGGAGGGAAAAUUUCGCC	648	0.963657
NC_002549.1	VP24	CAAGGAAUCUCUUUCCUCA	UGAGGAAAGAGAUUCCUUG	215	0.963223
NC_002549.1	VP24	GAGCAGUAUUGAAAUUGGA	UCCAAUUUCAAUACUGCUC	528	0.957942
NC_002549.1	VP24	GAUCCAAUAUUCUCAAGUU	AACUUGAGAAUAUUGGAUC	461	0.956722
NC_002549.1	VP24	GCCCUAUUGCAUAGACUGA	UCAGUCUAUGCAAUAGGGC	163	0.955248
NC_002549.1	VP24	UCUCAAGUUUAUUAACAAA	UUUGUUAAUAAACUUGAGA	471	0.954380
NC_002549.1	VP24	CUUUCCUCAUUUAUUUCAA	UUGAAAUAAAUGAGGAAAG	225	0.953425
NC_002549.1	VP24	GGGUUGUCUUAAGCGACCU	AGGUCGCUUAAGACAACCC	59	0.951450
NC_002549.1	VP24	UCUUAAGCGACCUCUGUAA	UUACAGAGGUCGCUUAAGA	65	0.950169
NC_002549.1	VP24	CCAACACUAACCAUUUCAA	UUGAAAUGGUUAGUGUUGG	386	0.949594
NC_002549.1	VP24	GGAACUCAAAAUCAUACAA	UUGUAUGAUUUUGAGUUCC	544	0.949423
NC_002549.1	VP24	GGAACAAUUGAGCCUAAAA	UUUUAGGCUCAAUUGUUCC	426	0.947341
NC_002549.1	VP24	UAUUGAAAUUGGAACUCAA	UUGAGUUCCAAUUUCAAUA	534	0.945447
NC_002549.1	VP24	GCGACCUCUGUAACUUCUU	AAGAAGUUACAGAGGUCGC	71	0.945417
NC_002549.1	VP24	CCCUAUUGCAUAGACUGAA	UUCAGUCUAUGCAAUAGGG	164	0.943643
NC_002549.1	VP24	CAUUUAUUUCAAAAUCCGA	UCGGAUUUUGAAAUAAAUG	232	0.943391
NC_002549.1	VP24	AUGCGAACACAACGUGUCA	UGACACGUUGUGUUCGCAU	406	0.934538
NC_002549.1	VP24	GGCUAAAGCUACGGGACGA	UCGUCCCGUAGCUUUAGCC	3	0.934042
NC_002549.1	VP24	GAUUGUUGAGCAGUAUUGA	UCAAUACUGCUCAACAAUC	521	0.932354
NC_002549.1	VP24	ACGGAUUGUUGAGCAGUAU	AUACUGCUCAACAAUCCGU	518	0.931927
NC_002549.1	VP24	GAACACAACGUGUCAAGGA	UCCUUGACACGUUGUGUUC	410	0.931790
NC_002549.1	VP24	GGUCAAUGACAAGGAAUCU	AGAUUCCUUGUCAUUGACC	206	0.930151
NC_002549.1	VP24	GAAAUUUUCCCUCCUUCAU	AUGAAGGAGGGAAAAUUUC	651	0.928838
NC_002549.1	VP24	CUUAGUUAGCCAAACUAUU	AAUAGUUUGGCUAACUAAG	87	0.928602
NC_002549.1	VP24	AACGUGUCAAGGAACAAUU	AAUUGUUCCUUGACACGUU	416	0.927993
NC_002549.1	VP24	GGAAUCUCUUUCCUCAUUU	AAAUGAGGAAAGAGAUUCC	218	0.926958
NC_002549.1	VP24	CAGCUGAUUGACCAGUCUU	AAGACUGGUCAAUCAGCUG	313	0.926424
NC_002549.1	VP24	AAGGGGUUGUCUUAAGCGA	UCGCUUAAGACAACCCCUU	56	0.925663
NC_002549.1	VP24	UGCUAACAACCAACACUAA	UUAGUGUUGGUUGUUAGCA	377	0.925254
NC_002549.1	VP24	AGGAAUCUCUUUCCUCAUU	AAUGAGGAAAGAGAUUCCU	217	0.923916
NC_002549.1	VP24	AGCUGAUUGACCAGUCUUU	AAAGACUGGUCAAUCAGCU	314	0.923718
NC_002549.1	VP24	CGGCGAAAUUUUCCCUCCU	AGGAGGGAAAAUUUCGCCG	647	0.921259
NC_002549.1	VP24	GAACAAUUGAGCCUAAAAA	UUUUUAGGCUCAAUUGUUC	427	0.921142
NC_002549.1	VP24	CUAAAGCUACGGGACGAUA	UAUCGUCCCGUAGCUUUAG	5	0.918871
NC_002549.1	VP24	AUGUGACUCACAAAGGAAU	AUUCCUUUGUGAGUCACAU	143	0.917898
NC_002549.1	VP24	CUCAAGUUUAUUAACAAAU	AUUUGUUAAUAAACUUGAG	472	0.915502
NC_002549.1	VP24	AAGGAACAAUUGAGCCUAA	UUAGGCUCAAUUGUUCCUU	424	0.912724
NC_002549.1	VP24	GAUCUCUGAUUGGCUGCUA	UAGCAGCCAAUCAGAGAUC	363	0.910642
NC_002549.1	VP24	UGCGAACACAACGUGUCAA	UUGACACGUUGUGUUCGCA	407	0.907635
NC_002549.1	VP24	CUAUUGCAUAGACUGAAAA	UUUUCAGUCUAUGCAAUAG	166	0.907477
NC_002549.1	VP24	GCGAACACAACGUGUCAAG	CUUGACACGUUGUGUUCGC	408	0.906999
NC_002549.1	VP24	GAUUGGCUGCUAACAACCA	UGGUUGUUAGCAGCCAAUC	370	0.905848
NC_002549.1	VP24	CUGCUAACAACCAACACUA	UAGUGUUGGUUGUUAGCAG	376	0.902474
NC_002549.1	VP24	AAUUGGAACUCAAAAUCAU	AUGAUUUUGAGUUCCAAUU	540	0.901801
NC_002549.1	VP24	AACGGAUUGUUGAGCAGUA	UACUGCUCAACAAUCCGUU	517	0.901669
NC_002549.1	VP24	AUUCGAUCCAAUAUUCUCA	UGAGAAUAUUGGAUCGAAU	457	0.900050
NC_002549.1	VP24	AGGAACAAUUGAGCCUAAA	UUUAGGCUCAAUUGUUCCU	425	0.899891
NC_002549.1	VP24	GUAUUGAAAUUGGAACUCA	UGAGUUCCAAUUUCAAUAC	533	0.899218
NC_002549.1	VP24	UCUUAGUUAGCCAAACUAU	AUAGUUUGGCUAACUAAGA	86	0.898563
NC_002549.1	VP24	UGUCGUUGAUUCGAUCCAA	UUGGAUCGAAUCAACGACA	449	0.897739
NC_002549.1	VP24	GAUCCUCGACACGAAUGCA	UGCAUUCGUGUCGAGGAUC	698	0.896976
NC_002549.1	VP24	AGUCCACACUGAAAGCAUU	AAUGCUUUCAGUGUGGACU	671	0.895794
NC_002549.1	VP24	GCCUAAAAAUGCUGUCGUU	AACGACAGCAUUUUUAGGC	437	0.894672
NC_002549.1	VP24	CAAGGAACAAUUGAGCCUA	UAGGCUCAAUUGUUCCUUG	423	0.894454
NC_002549.1	VP24	UAACAAAUUGGAUGCUCUA	UAGAGCAUCCAAUUUGUUA	483	0.892310
NC_002549.1	VP24	GAUUGAACCCUUAGCAGGA	UCCUGCUAAGGGUUCAAUC	333	0.890325
NC_002549.1	VP24	CACGAAUGCAAAGUUUGAU	AUCAAACUUUGCAUUCGUG	707	0.888990
NC_002549.1	VP24	CUACGGGACGAUACAAUCU	AGAUUGUAUCGUCCCGUAG	11	0.887402
NC_002549.1	VP24	CCUCGACACGAAUGCAAAG	CUUUGCAUUCGUGUCGAGG	701	0.885281
NC_002549.1	VP24	GUUGAUUCGAUCCAAUAUU	AAUAUUGGAUCGAAUCAAC	453	0.882528
NC_002549.1	VP24	AUCUCUUUCCUCAUUUAUU	AAUAAAUGAGGAAAGAGAU	221	0.882194
NC_002549.1	VP24	AUCUCUGAUUGGCUGCUAA	UUAGCAGCCAAUCAGAGAU	364	0.881241
NC_002549.1	VP24	AAUAUUCUCAAGUUUAUUA	UAAUAAACUUGAGAAUAUU	466	0.881023
NC_002549.1	VP24	AUUGGAACUCAAAAUCAUA	UAUGAUUUUGAGUUCCAAU	541	0.880777
NC_002549.1	VP24	ACAUGCGAACACAACGUGU	ACACGUUGUGUUCGCAUGU	404	0.879450
NC_002549.1	VP24	GUUGUCUUAAGCGACCUCU	AGAGGUCGCUUAAGACAAC	61	0.878574
NC_002549.1	VP24	UGUCUUAAGCGACCUCUGU	ACAGAGGUCGCUUAAGACA	63	0.878461
NC_002549.1	VP24	GAAUGCAAAGUUUGAUUCU	AGAAUCAAACUUUGCAUUC	710	0.877873
NC_002549.1	VP24	ACGAAUGCAAAGUUUGAUU	AAUCAAACUUUGCAUUCGU	708	0.877775
NC_002549.1	VP24	GCUAAAGCUACGGGACGAU	AUCGUCCCGUAGCUUUAGC	4	0.877530
NC_002549.1	VP24	UACGGGACGAUACAAUCUA	UAGAUUGUAUCGUCCCGUA	12	0.877270
NC_002549.1	VP24	AAAUUGGAACUCAAAAUCA	UGAUUUUGAGUUCCAAUUU	539	0.877186
NC_002549.1	VP24	GAGUCCACACUGAAAGCAU	AUGCUUUCAGUGUGGACUC	670	0.877134
NC_002549.1	VP24	UUCGAUCCAAUAUUCUCAA	UUGAGAAUAUUGGAUCGAA	458	0.874118
NC_002549.1	VP24	UUCUCAAGUUUAUUAACAA	UUGUUAAUAAACUUGAGAA	470	0.871137
NC_002549.1	VP24	ACAACGGAUUGUUGAGCAG	CUGCUCAACAAUCCGUUGU	515	0.869763
NC_002549.1	VP24	GGAAUGGCCCUAUUGCAUA	UAUGCAAUAGGGCCAUUCC	157	0.869607
NC_002549.1	VP24	ACAAAUUGGAUGCUCUACA	UGUAGAGCAUCCAAUUUGU	485	0.865707
NC_002549.1	VP24	UCGACACGAAUGCAAAGUU	AACUUUGCAUUCGUGUCGA	703	0.865434
NC_002549.1	VP24	AAAGCUACGGGACGAUACA	UGUAUCGUCCCGUAGCUUU	7	0.864971
NC_002549.1	VP24	ACGUGUCAAGGAACAAUUG	CAAUUGUUCCUUGACACGU	417	0.863251
NC_002549.1	VP24	AUUGUUGAGCAGUAUUGAA	UUCAAUACUGCUCAACAAU	522	0.862865
NC_002549.1	VP24	UCAUGAGUCCACACUGAAA	UUUCAGUGUGGACUCAUGA	666	0.862548
NC_002549.1	VP24	CUCAAAAUCAUACAAUCAU	AUGAUUGUAUGAUUUUGAG	548	0.861343
NC_002549.1	VP24	GGACCAGCUGAUUGACCAG	CUGGUCAAUCAGCUGGUCC	309	0.860499
NC_002549.1	VP24	GCUGCUAACAACCAACACU	AGUGUUGGUUGUUAGCAGC	375	0.860185
NC_002549.1	VP24	GAUUCGAUCCAAUAUUCUC	GAGAAUAUUGGAUCGAAUC	456	0.859363
NC_002549.1	VP24	GGGAUACAGGACCAGCUGA	UCAGCUGGUCCUGUAUCCC	301	0.858954
NC_002549.1	VP24	GCGAAAUUUUCCCUCCUUC	GAAGGAGGGAAAAUUUCGC	649	0.858276
NC_002549.1	VP24	AAUCUCUUUCCUCAUUUAU	AUAAAUGAGGAAAGAGAUU	220	0.858088
NC_002549.1	VP24	GGAUUGUUGAGCAGUAUUG	CAAUACUGCUCAACAAUCC	520	0.857192
NC_002549.1	VP24	UGCAAAGUUUGAUUCUUGA	UCAAGAAUCAAACUUUGCA	713	0.856687
NC_002549.1	VP24	GCUACGGGACGAUACAAUC	GAUUGUAUCGUCCCGUAGC	10	0.856226
NC_002549.1	VP24	CUUCAUGAGUCCACACUGA	UCAGUGUGGACUCAUGAAG	664	0.856163
NC_002549.1	VP24	GAACUCAAAAUCAUACAAU	AUUGUAUGAUUUUGAGUUC	545	0.854190
NC_002549.1	VP24	GAACCCGACAAAUCGGCAA	UUGCCGAUUUGUCGGGUUC	607	0.854084
NC_002549.1	VP24	AGCAGUAUUGAAAUUGGAA	UUCCAAUUUCAAUACUGCU	529	0.853920
NC_002549.1	VP24	CUGCAUGGUCAAUGACAAG	CUUGUCAUUGACCAUGCAG	200	0.853862
NC_002549.1	VP24	CACUGAAAGCAUUUACACA	UGUGUAAAUGCUUUCAGUG	677	0.853201
NC_002549.1	VP24	AGCUACGGGACGAUACAAU	AUUGUAUCGUCCCGUAGCU	9	0.852836
NC_002549.1	VP24	UCUGAUUGGCUGCUAACAA	UUGUUAGCAGCCAAUCAGA	367	0.852709
NC_002549.1	VP24	AAGCUACGGGACGAUACAA	UUGUAUCGUCCCGUAGCUU	8	0.850642
NC_002549.1	VP24	AGGACCAGCUGAUUGACCA	UGGUCAAUCAGCUGGUCCU	308	0.850563
NC_002549.1	VP24	CCAGCUGAUUGACCAGUCU	AGACUGGUCAAUCAGCUGG	312	0.850395
NC_002549.1	VP24	GUUGAGCAGUAUUGAAAUU	AAUUUCAAUACUGCUCAAC	525	0.850152
NC_002549.1	VP24	AUCCUCGACACGAAUGCAA	UUGCAUUCGUGUCGAGGAU	699	0.849548
NC_002549.1	VP24	CAUCCUUGCAGCAGGGAUA	UAUCCCUGCUGCAAGGAUG	288	0.849026
NC_002549.1	VP24	AUUGAAAUUGGAACUCAAA	UUUGAGUUCCAAUUUCAAU	535	0.848115
NC_002549.1	VP24	AGCGACCUCUGUAACUUCU	AGAAGUUACAGAGGUCGCU	70	0.846378
NC_002549.1	VP24	CUAAAAAUGCUGUCGUUGA	UCAACGACAGCAUUUUUAG	439	0.846321
NC_002549.1	VP24	CCUCCUUCAUGAGUCCACA	UGUGGACUCAUGAAGGAGG	660	0.845679
NC_002549.1	VP24	GUGUCAAGGAACAAUUGAG	CUCAAUUGUUCCUUGACAC	419	0.843198
NC_002549.1	VP24	UCAAUGACAAGGAAUCUCU	AGAGAUUCCUUGUCAUUGA	208	0.842763
NC_002549.1	VP24	CGAUCCAAUAUUCUCAAGU	ACUUGAGAAUAUUGGAUCG	460	0.841150
NC_002549.1	VP24	GACAAGGAAUCUCUUUCCU	AGGAAAGAGAUUCCUUGUC	213	0.840975
NC_002549.1	VP24	CAAACUAUUCAGGGGUGGA	UCCACCCCUGAAUAGUUUG	97	0.840896
NC_002549.1	VP24	GACGAUACAAUCUAAUAUC	GAUAUUAGAUUGUAUCGUC	17	0.840704
NC_002549.1	VP24	CACACUGAAAGCAUUUACA	UGUAAAUGCUUUCAGUGUG	675	0.840533
NC_002549.1	VP24	GUCGUUGAUUCGAUCCAAU	AUUGGAUCGAAUCAACGAC	450	0.840105
NC_002549.1	VP24	CGAACACAACGUGUCAAGG	CCUUGACACGUUGUGUUCG	409	0.839524
NC_002549.1	VP24	UAGUUAGCCAAACUAUUCA	UGAAUAGUUUGGCUAACUA	89	0.839128
NC_002549.1	VP24	GCAUUUACACAAGGAUCCU	AGGAUCCUUGUGUAAAUGC	685	0.837152
NC_002549.1	VP24	AGCUCCAAGAACCCGACAA	UUGUCGGGUUCUUGGAGCU	599	0.837132
NC_002549.1	VP24	AGUUUAUUAACAAAUUGGA	UCCAAUUUGUUAAUAAACU	476	0.835484
NC_002549.1	VP24	AUUGGCUGCUAACAACCAA	UUGGUUGUUAGCAGCCAAU	371	0.835010
NC_002549.1	VP24	GAAUGGCCCUAUUGCAUAG	CUAUGCAAUAGGGCCAUUC	158	0.833888
NC_002549.1	VP24	UAACCAUUUCAACAUGCGA	UCGCAUGUUGAAAUGGUUA	393	0.832463
NC_002549.1	VP24	AACCAUUUCAACAUGCGAA	UUCGCAUGUUGAAAUGGUU	394	0.832408
NC_002549.1	VP24	GGAUACAGGACCAGCUGAU	AUCAGCUGGUCCUGUAUCC	302	0.832208
NC_002549.1	VP24	GAUACAGGACCAGCUGAUU	AAUCAGCUGGUCCUGUAUC	303	0.830948
NC_002549.1	VP24	AGUUAGCCAAACUAUUCAG	CUGAAUAGUUUGGCUAACU	90	0.829361
NC_002549.1	VP24	UCGUUGAUUCGAUCCAAUA	UAUUGGAUCGAAUCAACGA	451	0.828590
NC_002549.1	VP24	ACUCAAAAUCAUACAAUCA	UGAUUGUAUGAUUUUGAGU	547	0.826381
NC_002549.1	VP24	AUGGUCAAUGACAAGGAAU	AUUCCUUGUCAUUGACCAU	204	0.825610
NC_002549.1	VP24	UCUCUUUCCUCAUUUAUUU	AAAUAAAUGAGGAAAGAGA	222	0.825558
NC_002549.1	VP24	AUUUAUUUCAAAAUCCGAA	UUCGGAUUUUGAAAUAAAU	233	0.825484
NC_002549.1	VP24	CUUCUUAGUUAGCCAAACU	AGUUUGGCUAACUAAGAAG	84	0.824971
NC_002549.1	VP24	CAACGGAUUGUUGAGCAGU	ACUGCUCAACAAUCCGUUG	516	0.822809
NC_002549.1	VP24	ACACAACGUGUCAAGGAAC	GUUCCUUGACACGUUGUGU	412	0.820255
NC_002549.1	VP24	AGGAAUGGCCCUAUUGCAU	AUGCAAUAGGGCCAUUCCU	156	0.819836
NC_002549.1	VP24	UACAGGACCAGCUGAUUGA	UCAAUCAGCUGGUCCUGUA	305	0.819584
NC_002549.1	VP24	GACCUCUGUAACUUCUUAG	CUAAGAAGUUACAGAGGUC	73	0.819140
NC_002549.1	VP24	UUGUCUUAAGCGACCUCUG	CAGAGGUCGCUUAAGACAA	62	0.819027
NC_002549.1	VP24	CAAAGUUUGAUUCUUGAAU	AUUCAAGAAUCAAACUUUG	715	0.818465
NC_002549.1	VP24	AAGGAAUCUCUUUCCUCAU	AUGAGGAAAGAGAUUCCUU	216	0.817683
NC_002549.1	VP24	UAAGCGACCUCUGUAACUU	AAGUUACAGAGGUCGCUUA	68	0.816849
NC_002549.1	VP24	CCAUUUCAACAUGCGAACA	UGUUCGCAUGUUGAAAUGG	396	0.815897
NC_002549.1	VP24	UUGCAUAGACUGAAAACUA	UAGUUUUCAGUCUAUGCAA	169	0.815859
NC_002549.1	VP24	UUCUUAGUUAGCCAAACUA	UAGUUUGGCUAACUAAGAA	85	0.814989
NC_002549.1	VP24	CGAAUGCAAAGUUUGAUUC	GAAUCAAACUUUGCAUUCG	709	0.812341
NC_002549.1	VP24	GAGCUCCAAGAACCCGACA	UGUCGGGUUCUUGGAGCUC	598	0.812031
NC_002549.1	VP24	GGACCUGGAGAAAGGGGUU	AACCCCUUUCUCCAGGUCC	45	0.811702
NC_002549.1	VP24	UGGAACUCAAAAUCAUACA	UGUAUGAUUUUGAGUUCCA	543	0.811630
NC_002549.1	VP24	CCUCAUUUAUUUCAAAAUC	GAUUUUGAAAUAAAUGAGG	229	0.811408
NC_002549.1	VP24	CUCCAAGAACCCGACAAAU	AUUUGUCGGGUUCUUGGAG	601	0.811406
NC_002549.1	VP24	UCAAGUUUAUUAACAAAUU	AAUUUGUUAAUAAACUUGA	473	0.809676
NC_002549.1	VP24	CUGUCGUUGAUUCGAUCCA	UGGAUCGAAUCAACGACAG	448	0.806829
NC_002549.1	VP24	AAAGCAUUUACACAAGGAU	AUCCUUGUGUAAAUGCUUU	682	0.806617
NC_002549.1	VP24	UCCUCAUUUAUUUCAAAAU	AUUUUGAAAUAAAUGAGGA	228	0.806523
NC_002549.1	VP24	UGGCUGCUAACAACCAACA	UGUUGGUUGUUAGCAGCCA	373	0.805177
NC_002549.1	VP24	UGAAAUUGGAACUCAAAAU	AUUUUGAGUUCCAAUUUCA	537	0.804767
NC_002549.1	VP24	UCAAAAUCCGAAUUCCACA	UGUGGAAUUCGGAUUUUGA	240	0.802530
NC_002549.1	VP24	AAUGACAAGGAAUCUCUUU	AAAGAGAUUCCUUGUCAUU	210	0.801132
NC_002549.1	VP24	GGUAUUGAGUUUGAUGUGA	UCACAUCAAACUCAAUACC	130	0.798321
NC_002549.1	VP24	GUCCACACUGAAAGCAUUU	AAAUGCUUUCAGUGUGGAC	672	0.797682
NC_002549.1	VP24	AAAUCAUACAAUCAUCAUA	UAUGAUGAUUGUAUGAUUU	552	0.796740
NC_002549.1	VP24	GGCCCUAUUGCAUAGACUG	CAGUCUAUGCAAUAGGGCC	162	0.796014
NC_002549.1	VP24	AGGGGUUGUCUUAAGCGAC	GUCGCUUAAGACAACCCCU	57	0.795293
NC_002549.1	VP24	CCCGACAAAUCGGCAAUGA	UCAUUGCCGAUUUGUCGGG	610	0.794720
NC_002549.1	VP24	CAAAAUCAUACAAUCAUCA	UGAUGAUUGUAUGAUUUUG	550	0.793967
NC_002549.1	VP24	CUCGACACGAAUGCAAAGU	ACUUUGCAUUCGUGUCGAG	702	0.790628
NC_002549.1	VP24	UGAUUCGAUCCAAUAUUCU	AGAAUAUUGGAUCGAAUCA	455	0.789865
NC_002549.1	VP24	CUCUUUCCUCAUUUAUUUC	GAAAUAAAUGAGGAAAGAG	223	0.788804
NC_002549.1	VP24	AAUCAUACAAUCAUCAUAA	UUAUGAUGAUUGUAUGAUU	553	0.787062
NC_002549.1	VP24	CUGAUUGGCUGCUAACAAC	GUUGUUAGCAGCCAAUCAG	368	0.786487
NC_002549.1	VP24	ACUACAACGGAUUGUUGAG	CUCAACAAUCCGUUGUAGU	512	0.785487
NC_002549.1	VP24	CCUGGGCCGGCGAAAUUUU	AAAAUUUCGCCGGCCCAGG	640	0.785006
NC_002549.1	VP24	UUUACACAAGGAUCCUCGA	UCGAGGAUCCUUGUGUAAA	688	0.784481
NC_002549.1	VP24	UUCCUCAUUUAUUUCAAAA	UUUUGAAAUAAAUGAGGAA	227	0.784381
NC_002549.1	VP24	CAGUAUUGAAAUUGGAACU	AGUUCCAAUUUCAAUACUG	531	0.783732
NC_002549.1	VP24	GGCCGGCGAAAUUUUCCCU	AGGGAAAAUUUCGCCGGCC	644	0.783730
NC_002549.1	VP24	ACAAUCUAAUAUCGCCCAA	UUGGGCGAUAUUAGAUUGU	23	0.782944
NC_002549.1	VP24	ACAAAGGAAUGGCCCUAUU	AAUAGGGCCAUUCCUUUGU	152	0.779832
NC_002549.1	VP24	UGGAGCUCCAAGAACCCGA	UCGGGUUCUUGGAGCUCCA	596	0.779445
NC_002549.1	VP24	AAUGCAAAGUUUGAUUCUU	AAGAAUCAAACUUUGCAUU	711	0.778897
NC_002549.1	VP24	CAUGCGAACACAACGUGUC	GACACGUUGUGUUCGCAUG	405	0.778307
NC_002549.1	VP24	AAUUGAGCCUAAAAAUGCU	AGCAUUUUUAGGCUCAAUU	431	0.776552
NC_002549.1	VP24	UGUUGAGCAGUAUUGAAAU	AUUUCAAUACUGCUCAACA	524	0.775613
NC_002549.1	VP24	AAGCGACCUCUGUAACUUC	GAAGUUACAGAGGUCGCUU	69	0.775345
NC_002549.1	VP24	UACAACGGAUUGUUGAGCA	UGCUCAACAAUCCGUUGUA	514	0.775273
NC_002549.1	VP24	UUUCCUCAUUUAUUUCAAA	UUUGAAAUAAAUGAGGAAA	226	0.772782
NC_002549.1	VP24	CUUAAGCGACCUCUGUAAC	GUUACAGAGGUCGCUUAAG	66	0.771519
NC_002549.1	VP24	AACAAUUGAGCCUAAAAAU	AUUUUUAGGCUCAAUUGUU	428	0.771155
NC_002549.1	VP24	GUUUAUUAACAAAUUGGAU	AUCCAAUUUGUUAAUAAAC	477	0.770305
NC_002549.1	VP24	UUCAUGAGUCCACACUGAA	UUCAGUGUGGACUCAUGAA	665	0.764389
NC_002549.1	VP24	GAAAUUGGAACUCAAAAUC	GAUUUUGAGUUCCAAUUUC	538	0.764153
NC_002549.1	VP24	CAACCAACACUAACCAUUU	AAAUGGUUAGUGUUGGUUG	383	0.763926
NC_002549.1	VP24	CCUUCAUGAGUCCACACUG	CAGUGUGGACUCAUGAAGG	663	0.763573
NC_002549.1	VP24	UGUGACUCACAAAGGAAUG	CAUUCCUUUGUGAGUCACA	144	0.763359
NC_002549.1	VP24	GGGGUUGUCUUAAGCGACC	GGUCGCUUAAGACAACCCC	58	0.762755
NC_002549.1	VP24	AAUUUUCCCUCCUUCAUGA	UCAUGAAGGAGGGAAAAUU	653	0.761967
NC_002549.1	VP24	ACCAACACUAACCAUUUCA	UGAAAUGGUUAGUGUUGGU	385	0.761871
NC_002549.1	VP24	AAUGCUGUCGUUGAUUCGA	UCGAAUCAACGACAGCAUU	444	0.761442
NC_002549.1	VP24	CCAAGAACCCGACAAAUCG	CGAUUUGUCGGGUUCUUGG	603	0.760591
NC_002549.1	VP24	CUCUGAUUGGCUGCUAACA	UGUUAGCAGCCAAUCAGAG	366	0.758450
NC_002549.1	VP24	GCUAACAACCAACACUAAC	GUUAGUGUUGGUUGUUAGC	378	0.758111
NC_002549.1	VP24	CAAGAACCCGACAAAUCGG	CCGAUUUGUCGGGUUCUUG	604	0.757673
NC_002549.1	VP24	AAACUAUUCAGGGGUGGAA	UUCCACCCCUGAAUAGUUU	98	0.755725
NC_002549.1	VP24	UUGUUGAGCAGUAUUGAAA	UUUCAAUACUGCUCAACAA	523	0.754589
NC_002549.1	VP24	GAGUCAUCCUUGCAGCAGG	CCUGCUGCAAGGAUGACUC	284	0.754301
NC_002549.1	VP24	UAAAAAUGCUGUCGUUGAU	AUCAACGACAGCAUUUUUA	440	0.754206
NC_002549.1	VP24	CACUAACCAUUUCAACAUG	CAUGUUGAAAUGGUUAGUG	390	0.753819
NC_002549.1	VP24	GCCUGGGCCGGCGAAAUUU	AAAUUUCGCCGGCCCAGGC	639	0.749035
NC_002549.1	VP24	CAUGAGUCCACACUGAAAG	CUUUCAGUGUGGACUCAUG	667	0.747683
NC_002549.1	VP24	UUUCAAAAUCCGAAUUCCA	UGGAAUUCGGAUUUUGAAA	238	0.746788
NC_002549.1	VP24	GGUGGAGCUCCAAGAACCC	GGGUUCUUGGAGCUCCACC	594	0.740232
NC_002549.1	VP24	GUCAAUGACAAGGAAUCUC	GAGAUUCCUUGUCAUUGAC	207	0.737779
NC_002549.1	VP24	AUGCUGUCGUUGAUUCGAU	AUCGAAUCAACGACAGCAU	445	0.736492
NC_002549.1	VP24	UUGAGUUUGAUGUGACUCA	UGAGUCACAUCAAACUCAA	134	0.735220
NC_002549.1	VP24	ACACUAACCAUUUCAACAU	AUGUUGAAAUGGUUAGUGU	389	0.735154
NC_002549.1	VP24	UUAACAAAUUGGAUGCUCU	AGAGCAUCCAAUUUGUUAA	482	0.734093
NC_002549.1	VP24	CACAAAGGAAUGGCCCUAU	AUAGGGCCAUUCCUUUGUG	151	0.734024
NC_002549.1	VP24	AAGGAAUGGCCCUAUUGCA	UGCAAUAGGGCCAUUCCUU	155	0.733762
NC_002549.1	VP24	GACCAGCUGAUUGACCAGU	ACUGGUCAAUCAGCUGGUC	310	0.732183
NC_002549.1	VP24	GGGUUUUCUGGUGGAGCUC	GAGCUCCACCAGAAAACCC	585	0.731683
NC_002549.1	VP24	CUUUGCCCCUGCAUGGUCA	UGACCAUGCAGGGGCAAAG	192	0.730746
NC_002549.1	VP24	GAAAGGGGUUGUCUUAAGC	GCUUAAGACAACCCCUUUC	54	0.729789
NC_002549.1	VP24	CGAUACAAUCUAAUAUCGC	GCGAUAUUAGAUUGUAUCG	19	0.728526
NC_002549.1	VP24	AAAGUUUGAUUCUUGAAUU	AAUUCAAGAAUCAAACUUU	716	0.727999
NC_002549.1	VP24	GGAGCUCCAAGAACCCGAC	GUCGGGUUCUUGGAGCUCC	597	0.727930
NC_002549.1	VP24	UUGAAAUUGGAACUCAAAA	UUUUGAGUUCCAAUUUCAA	536	0.727866
NC_002549.1	VP24	ACCUCUGUAACUUCUUAGU	ACUAAGAAGUUACAGAGGU	74	0.726799
NC_002549.1	VP24	ACACAAGGAUCCUCGACAC	GUGUCGAGGAUCCUUGUGU	691	0.726186
NC_002549.1	VP24	GGAUGCUCUACAUGUCGUG	CACGACAUGUAGAGCAUCC	492	0.726092
NC_002549.1	VP24	UGAGUUUGAUGUGACUCAC	GUGAGUCACAUCAAACUCA	135	0.725318
NC_002549.1	VP24	AACCCGACAAAUCGGCAAU	AUUGCCGAUUUGUCGGGUU	608	0.725118
NC_002549.1	VP24	UGCUGUCGUUGAUUCGAUC	GAUCGAAUCAACGACAGCA	446	0.724680
NC_002549.1	VP24	CAAUUGAGCCUAAAAAUGC	GCAUUUUUAGGCUCAAUUG	430	0.722476
NC_002549.1	VP24	AACACUAACCAUUUCAACA	UGUUGAAAUGGUUAGUGUU	388	0.722267
NC_002549.1	VP24	CUCAUUUAUUUCAAAAUCC	GGAUUUUGAAAUAAAUGAG	230	0.721919
NC_002549.1	VP24	GUGACUCACAAAGGAAUGG	CCAUUCCUUUGUGAGUCAC	145	0.721128
NC_002549.1	VP24	CCUAAAAAUGCUGUCGUUG	CAACGACAGCAUUUUUAGG	438	0.720868
NC_002549.1	VP24	CAACACUAACCAUUUCAAC	GUUGAAAUGGUUAGUGUUG	387	0.720853
NC_002549.1	VP24	UCAAGGAACAAUUGAGCCU	AGGCUCAAUUGUUCCUUGA	422	0.717836
NC_002549.1	VP24	UCAUCCUUGCAGCAGGGAU	AUCCCUGCUGCAAGGAUGA	287	0.716453
NC_002549.1	VP24	GCUGGUAUUGAGUUUGAUG	CAUCAAACUCAAUACCAGC	127	0.715129
NC_002549.1	VP24	UGGUCAAUGACAAGGAAUC	GAUUCCUUGUCAUUGACCA	205	0.715002
NC_002549.1	VP24	UCGAUCCAAUAUUCUCAAG	CUUGAGAAUAUUGGAUCGA	459	0.714472
NC_002549.1	VP24	GGCUGCUAACAACCAACAC	GUGUUGGUUGUUAGCAGCC	374	0.713277
NC_002549.1	VP24	UUUAUUUCAAAAUCCGAAU	AUUCGGAUUUUGAAAUAAA	234	0.712593
NC_002549.1	VP24	UCCACACUGAAAGCAUUUA	UAAAUGCUUUCAGUGUGGA	673	0.712362
NC_002549.1	VP24	CUUGGUCUGAUCUCUGAUU	AAUCAGAGAUCAGACCAAG	355	0.711783
NC_002549.1	VP24	GUCUGAUCUCUGAUUGGCU	AGCCAAUCAGAGAUCAGAC	359	0.711521
NC_002549.1	VP24	UCUUUCCUCAUUUAUUUCA	UGAAAUAAAUGAGGAAAGA	224	0.710602
NC_002549.1	VP24	ACAACCAACACUAACCAUU	AAUGGUUAGUGUUGGUUGU	382	0.709998
NC_002549.1	VP24	UCCUUGCAGCAGGGAUACA	UGUAUCCCUGCUGCAAGGA	290	0.708277
NC_002549.1	VP24	AGAACCCGACAAAUCGGCA	UGCCGAUUUGUCGGGUUCU	606	0.708116
NC_002549.1	VP24	ACGAUACAAUCUAAUAUCG	CGAUAUUAGAUUGUAUCGU	18	0.707539
NC_002549.1	VP24	UCACAAAGGAAUGGCCCUA	UAGGGCCAUUCCUUUGUGA	150	0.705737
NC_002549.1	VP24	UAAAGCUACGGGACGAUAC	GUAUCGUCCCGUAGCUUUA	6	0.704658
NC_002549.1	VP24	UACACAAGGAUCCUCGACA	UGUCGAGGAUCCUUGUGUA	690	0.704472
NC_002549.1	VP24	CCACACUGAAAGCAUUUAC	GUAAAUGCUUUCAGUGUGG	674	0.703681
NC_002549.1	VP24	UGGCCCUAUUGCAUAGACU	AGUCUAUGCAAUAGGGCCA	161	0.703297
NC_002549.1	VP24	ACAAUUGAGCCUAAAAAUG	CAUUUUUAGGCUCAAUUGU	429	0.703095
NC_002549.1	VP24	GAGCCUAAAAAUGCUGUCG	CGACAGCAUUUUUAGGCUC	435	0.702556
NC_002549.1	VP24	GCCAAACUAUUCAGGGGUG	CACCCCUGAAUAGUUUGGC	95	0.701211
NC_002549.1	VP24	UGGAUGCUCUACAUGUCGU	ACGACAUGUAGAGCAUCCA	491	0.700715
NC_002549.1	VP24	GAUACAAUCUAAUAUCGCC	GGCGAUAUUAGAUUGUAUC	20	0.697860
NC_002549.1	VP24	CCGGCGAAAUUUUCCCUCC	GGAGGGAAAAUUUCGCCGG	646	0.697598
NC_002549.1	VP24	AAGCAUUUACACAAGGAUC	GAUCCUUGUGUAAAUGCUU	683	0.696896
NC_002549.1	VP24	GUCAUCCUUGCAGCAGGGA	UCCCUGCUGCAAGGAUGAC	286	0.694455
NC_002549.1	VP24	GGAUCCUCGACACGAAUGC	GCAUUCGUGUCGAGGAUCC	697	0.691333
NC_002549.1	VP24	AUGCAAAGUUUGAUUCUUG	CAAGAAUCAAACUUUGCAU	712	0.690410
NC_002549.1	VP24	AUUCUCAAGUUUAUUAACA	UGUUAAUAAACUUGAGAAU	469	0.687821
NC_002549.1	VP24	UAACAACCAACACUAACCA	UGGUUAGUGUUGGUUGUUA	380	0.687481
NC_002549.1	VP24	GACUCACAAAGGAAUGGCC	GGCCAUUCCUUUGUGAGUC	147	0.685685
NC_002549.1	VP24	CCCUCCUUCAUGAGUCCAC	GUGGACUCAUGAAGGAGGG	659	0.684960
NC_002549.1	VP24	CAAAGGAAUGGCCCUAUUG	CAAUAGGGCCAUUCCUUUG	153	0.684604
NC_002549.1	VP24	GUAUUGAGUUUGAUGUGAC	GUCACAUCAAACUCAAUAC	131	0.683995
NC_002549.1	VP24	CUCACAAAGGAAUGGCCCU	AGGGCCAUUCCUUUGUGAG	149	0.683586
NC_002549.1	VP24	ACCUGGAGAAAGGGGUUGU	ACAACCCCUUUCUCCAGGU	47	0.680017
NC_002549.1	VP24	ACAUGGGUUUUCUGGUGGA	UCCACCAGAAAACCCAUGU	581	0.678640
NC_002549.1	VP24	AGGGAUACAGGACCAGCUG	CAGCUGGUCCUGUAUCCCU	300	0.677611
NC_002549.1	VP24	AGCCUGGGCCGGCGAAAUU	AAUUUCGCCGGCCCAGGCU	638	0.674861
NC_002549.1	VP24	CUAUUCAGGGGUGGAAGGU	ACCUUCCACCCCUGAAUAG	101	0.674255
NC_002549.1	VP24	UUGAUUCGAUCCAAUAUUC	GAAUAUUGGAUCGAAUCAA	454	0.673973
NC_002549.1	VP24	AGCCUAAAAAUGCUGUCGU	ACGACAGCAUUUUUAGGCU	436	0.673458
NC_002549.1	VP24	UAUUGAGUUUGAUGUGACU	AGUCACAUCAAACUCAAUA	132	0.672782
NC_002549.1	VP24	UUAAGCGACCUCUGUAACU	AGUUACAGAGGUCGCUUAA	67	0.671612
NC_002549.1	VP24	UACAAUCUAAUAUCGCCCA	UGGGCGAUAUUAGAUUGUA	22	0.671483
NC_002549.1	VP24	UGGUGGAGCUCCAAGAACC	GGUUCUUGGAGCUCCACCA	593	0.669734
NC_002549.1	VP24	UUAUUUCAAAAUCCGAAUU	AAUUCGGAUUUUGAAAUAA	235	0.669268
NC_002549.1	VP24	AUACAGGACCAGCUGAUUG	CAAUCAGCUGGUCCUGUAU	304	0.667700
NC_002549.1	VP24	GCAGUAUUGAAAUUGGAAC	GUUCCAAUUUCAAUACUGC	530	0.665386
NC_002549.1	VP24	ACCAUUUCAACAUGCGAAC	GUUCGCAUGUUGAAAUGGU	395	0.664729
NC_002549.1	VP24	AAAAAUGCUGUCGUUGAUU	AAUCAACGACAGCAUUUUU	441	0.664455
NC_002549.1	VP24	ACUUCUUAGUUAGCCAAAC	GUUUGGCUAACUAAGAAGU	83	0.663557
NC_002549.1	VP24	ACCAGCUGAUUGACCAGUC	GACUGGUCAAUCAGCUGGU	311	0.663482
NC_002549.1	VP24	UCAUACAAUCAUCAUAACU	AGUUAUGAUGAUUGUAUGA	555	0.663115
NC_002549.1	VP24	GCUGUCGUUGAUUCGAUCC	GGAUCGAAUCAACGACAGC	447	0.663105
NC_002549.1	VP24	GACCUGGAGAAAGGGGUUG	CAACCCCUUUCUCCAGGUC	46	0.662272
NC_002549.1	VP24	UAUUCUCAAGUUUAUUAAC	GUUAAUAAACUUGAGAAUA	468	0.661870
NC_002549.1	VP24	UGAGCAGUAUUGAAAUUGG	CCAAUUUCAAUACUGCUCA	527	0.659070
NC_002549.1	VP24	AGUCAUCCUUGCAGCAGGG	CCCUGCUGCAAGGAUGACU	285	0.656130
NC_002549.1	VP24	UUUGAUGUGACUCACAAAG	CUUUGUGAGUCACAUCAAA	139	0.653879
NC_002549.1	VP24	AAUGGCCCUAUUGCAUAGA	UCUAUGCAAUAGGGCCAUU	159	0.653019
NC_002549.1	VP24	AUUGCAUAGACUGAAAACU	AGUUUUCAGUCUAUGCAAU	168	0.652670
NC_002549.1	VP24	CUGGGCCGGCGAAAUUUUC	GAAAAUUUCGCCGGCCCAG	641	0.649759
NC_002549.1	VP24	AGCCAAACUAUUCAGGGGU	ACCCCUGAAUAGUUUGGCU	94	0.648451
NC_002549.1	VP24	GGUUUUCUGGUGGAGCUCC	GGAGCUCCACCAGAAAACC	586	0.644746
NC_002549.1	VP24	UUGAUGUGACUCACAAAGG	CCUUUGUGAGUCACAUCAA	140	0.644518
NC_002549.1	VP24	ACAAGGAAUCUCUUUCCUC	GAGGAAAGAGAUUCCUUGU	214	0.643459
NC_002549.1	VP24	UCCCUCCUUCAUGAGUCCA	UGGACUCAUGAAGGAGGGA	658	0.642929
NC_002549.1	VP24	UGAGUCCACACUGAAAGCA	UGCUUUCAGUGUGGACUCA	669	0.642661
NC_002549.1	VP24	AACUAUUCAGGGGUGGAAG	CUUCCACCCCUGAAUAGUU	99	0.641466
NC_002549.1	VP24	UCUCUGAUUGGCUGCUAAC	GUUAGCAGCCAAUCAGAGA	365	0.638792
NC_002549.1	VP24	AACAAAUUGGAUGCUCUAC	GUAGAGCAUCCAAUUUGUU	484	0.637788
NC_002549.1	VP24	UUAGUUAGCCAAACUAUUC	GAAUAGUUUGGCUAACUAA	88	0.637041
NC_002549.1	VP24	UUUGCCCCUGCAUGGUCAA	UUGACCAUGCAGGGGCAAA	193	0.635677
NC_002549.1	VP24	AUGACAAGGAAUCUCUUUC	GAAAGAGAUUCCUUGUCAU	211	0.634657
NC_002549.1	VP24	AAAAUCAUACAAUCAUCAU	AUGAUGAUUGUAUGAUUUU	551	0.633571
NC_002549.1	VP24	AGCAUUUACACAAGGAUCC	GGAUCCUUGUGUAAAUGCU	684	0.633521
NC_002549.1	VP24	GCCGGCGAAAUUUUCCCUC	GAGGGAAAAUUUCGCCGGC	645	0.633497
NC_002549.1	VP24	CUAACAACCAACACUAACC	GGUUAGUGUUGGUUGUUAG	379	0.631731
NC_002549.1	VP24	UUGGCUGCUAACAACCAAC	GUUGGUUGUUAGCAGCCAA	372	0.630086
NC_002549.1	VP24	ACUAUUCAGGGGUGGAAGG	CCUUCCACCCCUGAAUAGU	100	0.630060
NC_002549.1	VP24	GUCAAGGAACAAUUGAGCC	GGCUCAAUUGUUCCUUGAC	421	0.628352
NC_002549.1	VP24	CAUUUCAACAUGCGAACAC	GUGUUCGCAUGUUGAAAUG	397	0.627234
NC_002549.1	VP24	CAUUUACACAAGGAUCCUC	GAGGAUCCUUGUGUAAAUG	686	0.626355
NC_002549.1	VP24	UGGUCUGAUCUCUGAUUGG	CCAAUCAGAGAUCAGACCA	357	0.625487
NC_002549.1	VP24	ACAGGACCAGCUGAUUGAC	GUCAAUCAGCUGGUCCUGU	306	0.625147
NC_002549.1	VP24	AUGGCUAAAGCUACGGGAC	GUCCCGUAGCUUUAGCCAU	1	0.622064
NC_002549.1	VP24	AAGUUUAUUAACAAAUUGG	CCAAUUUGUUAAUAAACUU	475	0.621409
NC_002549.1	VP24	AACCCUUAGCAGGAGCCCU	AGGGCUCCUGCUAAGGGUU	338	0.620779
NC_002549.1	VP24	UGAUUGGCUGCUAACAACC	GGUUGUUAGCAGCCAAUCA	369	0.620429
NC_002549.1	VP24	UCAUUUAUUUCAAAAUCCG	CGGAUUUUGAAAUAAAUGA	231	0.619045
NC_002549.1	VP24	UGAUUGAACCCUUAGCAGG	CCUGCUAAGGGUUCAAUCA	332	0.618954
NC_002549.1	VP24	AGGACCUGGAGAAAGGGGU	ACCCCUUUCUCCAGGUCCU	44	0.618742
NC_002549.1	VP24	UUCAAAAUCCGAAUUCCAC	GUGGAAUUCGGAUUUUGAA	239	0.617387
NC_002549.1	VP24	AACUCAAAAUCAUACAAUC	GAUUGUAUGAUUUUGAGUU	546	0.616582
NC_002549.1	VP24	CUAACCAUUUCAACAUGCG	CGCAUGUUGAAAUGGUUAG	392	0.615536
NC_002549.1	VP24	UGCAUGGUCAAUGACAAGG	CCUUGUCAUUGACCAUGCA	201	0.613464
NC_002549.1	VP24	UCUGAUCUCUGAUUGGCUG	CAGCCAAUCAGAGAUCAGA	360	0.612415
NC_002549.1	VP24	GAAGCCUGGGCCGGCGAAA	UUUCGCCGGCCCAGGCUUC	636	0.610679
NC_002549.1	VP24	GUGGAGCUCCAAGAACCCG	CGGGUUCUUGGAGCUCCAC	595	0.609837
NC_002549.1	VP24	AUUGAGCCUAAAAAUGCUG	CAGCAUUUUUAGGCUCAAU	432	0.609089
NC_002549.1	VP24	UCCAAGAACCCGACAAAUC	GAUUUGUCGGGUUCUUGGA	602	0.608742
NC_002549.1	VP24	UGAGCCUAAAAAUGCUGUC	GACAGCAUUUUUAGGCUCA	434	0.608341
NC_002549.1	VP24	UUGGAACUCAAAAUCAUAC	GUAUGAUUUUGAGUUCCAA	542	0.607459
NC_002549.1	VP24	AAAGGGGUUGUCUUAAGCG	CGCUUAAGACAACCCCUUU	55	0.606643
NC_002549.1	VP24	AACAACCAACACUAACCAU	AUGGUUAGUGUUGGUUGUU	381	0.605960
NC_002549.1	VP24	UCAAAAUCAUACAAUCAUC	GAUGAUUGUAUGAUUUUGA	549	0.604304
NC_002549.1	VP24	CUCCUUCAUGAGUCCACAC	GUGUGGACUCAUGAAGGAG	661	0.603830
NC_002549.1	VP24	UGACAAGGAAUCUCUUUCC	GGAAAGAGAUUCCUUGUCA	212	0.603711
NC_002549.1	VP24	CCAAACUAUUCAGGGGUGG	CCACCCCUGAAUAGUUUGG	96	0.603398
NC_002549.1	VP24	GUUAGCCAAACUAUUCAGG	CCUGAAUAGUUUGGCUAAC	91	0.600868
NC_002549.1	VP24	CUGGUAUUGAGUUUGAUGU	ACAUCAAACUCAAUACCAG	128	0.599569
NC_002549.1	VP24	AAAAUGCUGUCGUUGAUUC	GAAUCAACGACAGCAUUUU	442	0.594919
NC_002549.1	VP24	UAUUAACAAAUUGGAUGCU	AGCAUCCAAUUUGUUAAUA	480	0.594530
NC_002549.1	VP24	AAAUUUUCCCUCCUUCAUG	CAUGAAGGAGGGAAAAUUU	652	0.593778
NC_002549.1	VP24	UGUCAAGGAACAAUUGAGC	GCUCAAUUGUUCCUUGACA	420	0.593689
NC_002549.1	VP24	UCCUUCAUGAGUCCACACU	AGUGUGGACUCAUGAAGGA	662	0.590978
NC_002549.1	VP24	GGGCCGGCGAAAUUUUCCC	GGGAAAAUUUCGCCGGCCC	643	0.589223
NC_002549.1	VP24	ACACUGAAAGCAUUUACAC	GUGUAAAUGCUUUCAGUGU	676	0.588037
NC_002549.1	VP24	UGGGUUUUCUGGUGGAGCU	AGCUCCACCAGAAAACCCA	584	0.583853
NC_002549.1	VP24	AGUAUUGAAAUUGGAACUC	GAGUUCCAAUUUCAAUACU	532	0.581227
NC_002549.1	VP24	CAGGACCAGCUGAUUGACC	GGUCAAUCAGCUGGUCCUG	307	0.580442
NC_002549.1	VP24	UUGAGAGUCAUCCUUGCAG	CUGCAAGGAUGACUCUCAA	280	0.580300
NC_002549.1	VP24	UUGAGCCUAAAAAUGCUGU	ACAGCAUUUUUAGGCUCAA	433	0.580229
NC_002549.1	VP24	AAUUGAAUCACCGCUGUGG	CCACAGCGGUGAUUCAAUU	258	0.579504
NC_002549.1	VP24	AUCCUUGCAGCAGGGAUAC	GUAUCCCUGCUGCAAGGAU	289	0.578010
NC_002549.1	VP24	UGAACCGCAUGAAGCCUGG	CCAGGCUUCAUGCGGUUCA	626	0.577783
NC_002549.1	VP24	AUGAAGCCUGGGCCGGCGA	UCGCCGGCCCAGGCUUCAU	634	0.577703
NC_002549.1	VP24	AUUGAACCCUUAGCAGGAG	CUCCUGCUAAGGGUUCAAU	334	0.576532
NC_002549.1	VP24	AUGAGUCCACACUGAAAGC	GCUUUCAGUGUGGACUCAU	668	0.574584
NC_002549.1	VP24	AAAUGCUGUCGUUGAUUCG	CGAAUCAACGACAGCAUUU	443	0.572286
NC_002549.1	VP24	UUGGUCUGAUCUCUGAUUG	CAAUCAGAGAUCAGACCAA	356	0.567830
NC_002549.1	VP24	UAUUGCAUAGACUGAAAAC	GUUUUCAGUCUAUGCAAUA	167	0.567469
NC_002549.1	VP24	GGUCUGAUCUCUGAUUGGC	GCCAAUCAGAGAUCAGACC	358	0.566455
NC_002549.1	VP24	UGAUCUCUGAUUGGCUGCU	AGCAGCCAAUCAGAGAUCA	362	0.566195
NC_002549.1	VP24	AUGGCCCUAUUGCAUAGAC	GUCUAUGCAAUAGGGCCAU	160	0.565073
NC_002549.1	VP24	AUUUCAAAAUCCGAAUUCC	GGAAUUCGGAUUUUGAAAU	237	0.562350
NC_002549.1	VP24	UUGCCCCUGCAUGGUCAAU	AUUGACCAUGCAGGGGCAA	194	0.559058
NC_002549.1	VP24	UGGCUAAAGCUACGGGACG	CGUCCCGUAGCUUUAGCCA	2	0.558394
NC_002549.1	VP24	AAGCCUGGGCCGGCGAAAU	AUUUCGCCGGCCCAGGCUU	637	0.556934
NC_002549.1	VP24	ACUUUGCCCCUGCAUGGUC	GACCAUGCAGGGGCAAAGU	191	0.556524
NC_002549.1	VP24	AUACAAUCUAAUAUCGCCC	GGGCGAUAUUAGAUUGUAU	21	0.553273
NC_002549.1	VP24	ACCCGACAAAUCGGCAAUG	CAUUGCCGAUUUGUCGGGU	609	0.552996
NC_002549.1	VP24	GAACCGCAUGAAGCCUGGG	CCCAGGCUUCAUGCGGUUC	627	0.550325
NC_002549.1	VP24	AUUUACACAAGGAUCCUCG	CGAGGAUCCUUGUGUAAAU	687	0.544347
NC_002549.1	VP24	UAGCCAAACUAUUCAGGGG	CCCCUGAAUAGUUUGGCUA	93	0.541416
NC_002549.1	VP24	UGAAGCCUGGGCCGGCGAA	UUCGCCGGCCCAGGCUUCA	635	0.540528
NC_002549.1	VP24	CUACAACGGAUUGUUGAGC	GCUCAACAAUCCGUUGUAG	513	0.540028
NC_002549.1	VP24	AUUUUCCCUCCUUCAUGAG	CUCAUGAAGGAGGGAAAAU	654	0.536428
NC_002549.1	VP24	UGACUCACAAAGGAAUGGC	GCCAUUCCUUUGUGAGUCA	146	0.535164
NC_002549.1	VP24	CUGAUCUCUGAUUGGCUGC	GCAGCCAAUCAGAGAUCAG	361	0.533760
NC_002549.1	VP24	GAACCCUUAGCAGGAGCCC	GGGCUCCUGCUAAGGGUUC	337	0.533382
NC_002549.1	VP24	AUCAUACAAUCAUCAUAAC	GUUAUGAUGAUUGUAUGAU	554	0.530754
NC_002549.1	VP24	ACUCACAAAGGAAUGGCCC	GGGCCAUUCCUUUGUGAGU	148	0.530036
NC_002549.1	VP24	UGGGCCGGCGAAAUUUUCC	GGAAAAUUUCGCCGGCCCA	642	0.529002
NC_002549.1	VP24	AUUGAGUUUGAUGUGACUC	GAGUCACAUCAAACUCAAU	133	0.527867
NC_002549.1	VP24	UUACACAAGGAUCCUCGAC	GUCGAGGAUCCUUGUGUAA	689	0.527471
NC_002549.1	VP24	CGCAUGAAGCCUGGGCCGG	CCGGCCCAGGCUUCAUGCG	631	0.526842
NC_002549.1	VP24	AUUAACAAAUUGGAUGCUC	GAGCAUCCAAUUUGUUAAU	481	0.525154
NC_002549.1	VP24	AUUGAAUCACCGCUGUGGG	CCCACAGCGGUGAUUCAAU	259	0.516924
NC_002549.1	VP24	UUGAGCAGUAUUGAAAUUG	CAAUUUCAAUACUGCUCAA	526	0.516291
NC_002549.1	VP24	UAUUUCAAAAUCCGAAUUC	GAAUUCGGAUUUUGAAAUA	236	0.512243
NC_002549.1	VP24	CCGCAUGAAGCCUGGGCCG	CGGCCCAGGCUUCAUGCGG	630	0.511226
NC_002549.1	VP24	AACCAACACUAACCAUUUC	GAAAUGGUUAGUGUUGGUU	384	0.507427
NC_002549.1	VP24	CAUGGGUUUUCUGGUGGAG	CUCCACCAGAAAACCCAUG	582	0.504279
NC_002549.1	VP24	UUUUCCCUCCUUCAUGAGU	ACUCAUGAAGGAGGGAAAA	655	0.498465
NC_002549.1	VP24	ACUAACCAUUUCAACAUGC	GCAUGUUGAAAUGGUUAGU	391	0.496314
NC_002549.1	VP24	UGCCCCUGCAUGGUCAAUG	CAUUGACCAUGCAGGGGCA	195	0.491615
NC_002549.1	VP24	UUCCCUCCUUCAUGAGUCC	GGACUCAUGAAGGAGGGAA	657	0.486585
NC_002549.1	VP24	GCAUGAAGCCUGGGCCGGC	GCCGGCCCAGGCUUCAUGC	632	0.481222
NC_002549.1	VP24	CAUGAAGCCUGGGCCGGCG	CGCCGGCCCAGGCUUCAUG	633	0.479321
NC_002549.1	VP24	AAACUAAUGACUUUGCCCC	GGGGCAAAGUCAUUAGUUU	182	0.468537
NC_002549.1	VP24	AAGAACCCGACAAAUCGGC	GCCGAUUUGUCGGGUUCUU	605	0.466884
NC_002549.1	VP24	UGAACCCUUAGCAGGAGCC	GGCUCCUGCUAAGGGUUCA	336	0.463135
NC_002549.1	VP24	AAAGGAAUGGCCCUAUUGC	GCAAUAGGGCCAUUCCUUU	154	0.458183
NC_002549.1	VP24	AACAUGGGUUUUCUGGUGG	CCACCAGAAAACCCAUGUU	580	0.445209
NC_002549.1	VP24	UUUCCCUCCUUCAUGAGUC	GACUCAUGAAGGAGGGAAA	656	0.432044
NC_002549.1	VP24	UUAGCCAAACUAUUCAGGG	CCCUGAAUAGUUUGGCUAA	92	0.415004
NC_002549.1	VP24	UUGAAUCACCGCUGUGGGC	GCCCACAGCGGUGAUUCAA	260	0.410816
NC_002549.1	VP24	ACCGCAUGAAGCCUGGGCC	GGCCCAGGCUUCAUGCGGU	629	0.381739
NC_002549.1	VP24	UUAUUAACAAAUUGGAUGC	GCAUCCAAUUUGUUAAUAA	479	0.366245
NC_002549.1	VP24	UUUAUUAACAAAUUGGAUG	CAUCCAAUUUGUUAAUAAA	478	0.365782
NC_002549.1	VP24	AACCGCAUGAAGCCUGGGC	GCCCAGGCUUCAUGCGGUU	628	0.309137
NC_002549.1	VP24	AUGGGUUUUCUGGUGGAGC	GCUCCACCAGAAAACCCAU	583	0.279290

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