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Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.
Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.
Result
StrainGenemRNAsiRNAPositionEfficacy
NC_002549.1VP40GAAGGUGACUUCUAAAAAUAUUUUUAGAAGUCACCUUC8221.097182
NC_002549.1VP40GUAAGAAGGUGACUUCUAAUUAGAAGUCACCUUCUUAC8181.058512
NC_002549.1VP40GGUAAGAAGGUGACUUCUAUAGAAGUCACCUUCUUACC8171.040837
NC_002549.1VP40AGAAGGUGACUUCUAAAAAUUUUUAGAAGUCACCUUCU8211.040128
NC_002549.1VP40CAAUAAUGACUUCACUCCAUGGAGUGAAGUCAUUAUUG7161.037400
NC_002549.1VP40CAAAGUGCUAAUGAAGCAAUUGCUUCAUUAGCACUUUG2551.028978
NC_002549.1VP40CAUUCAUCCUUGAAGCUAUAUAGCUUCAAGGAUGAAUG2151.024460
NC_002549.1VP40GGUGACUUCUAAAAAUGGAUCCAUUUUUAGAAGUCACC8251.019099
NC_002549.1VP40GACUUCUAAAAAUGGACAAUUGUCCAUUUUUAGAAGUC8281.013072
NC_002549.1VP40CUUCACUCCAGGACUUUAAUUAAAGUCCUGGAGUGAAG7251.008550
NC_002549.1VP40GCUGAUCAAAAGACCUACAUGUAGGUCUUUUGAUCAGC3011.006823
NC_002549.1VP40CCCAGUAUUUCACCUUUGAUCAAAGGUGAAAUACUGGG5060.994898
NC_002549.1VP40CGGAGAAAAUCCAAGCAAUAUUGCUUGGAUUUUCUCCG7010.992134
NC_002549.1VP40AAAGUGCUAAUGAAGCAAAUUUGCUUCAUUAGCACUUU2560.991974
NC_002549.1VP40AGCUAUGGUGAAUGUCAUAUAUGACAUUCACCAUAGCU2280.989547
NC_002549.1VP40CAGAAACUCUGGUCCACAAUUGUGGACCAGAGUUUCUG7910.985150
NC_002549.1VP40GGAAUUUCAUUUCAUCCAAUUGGAUGAAAUGAAAUUCC6160.984779
NC_002549.1VP40AAGAAGGUGACUUCUAAAAUUUUAGAAGUCACCUUCUU8200.980676
NC_002549.1VP40GAAGCUAUGGUGAAUGUCAUGACAUUCACCAUAGCUUC2260.976979
NC_002549.1VP40GCUAAUGAAGCAAAUUCCAUGGAAUUUGCUUCAUUAGC2610.974372
NC_002549.1VP40GGUGUCGCUGAUCAAAAGAUCUUUUGAUCAGCGACACC2950.973146
NC_002549.1VP40ACUUCACUCCAGGACUUUAUAAAGUCCUGGAGUGAAGU7240.972439
NC_002549.1VP40ACCUACAGCUUUGACUCAAUUGAGUCAAAGCUGUAGGU3130.971021
NC_002549.1VP40UAAGAAGGUGACUUCUAAAUUUAGAAGUCACCUUCUUA8190.966383
NC_002549.1VP40GGAGAAAAUCCAAGCAAUAUAUUGCUUGGAUUUUCUCC7020.960206
NC_002549.1VP40CCAAAGUGCUAAUGAAGCAUGCUUCAUUAGCACUUUGG2540.956379
NC_002549.1VP40CGGUAAGAAGGUGACUUCUAGAAGUCACCUUCUUACCG8160.950745
NC_002549.1VP40CUAAUGAAGCAAAUUCCAAUUGGAAUUUGCUUCAUUAG2620.950426
NC_002549.1VP40GACCUACAGCUUUGACUCAUGAGUCAAAGCUGUAGGUC3120.949694
NC_002549.1VP40CACACCAGGCAGUGUGUCAUGACACACUGCCUGGUGUG1920.948528
NC_002549.1VP40CUAAAAAUGGACAACCAAUAUUGGUUGUCCAUUUUUAG8330.939121
NC_002549.1VP40UCUAGGUGUCGCUGAUCAAUUGAUCAGCGACACCUAGA2910.938606
NC_002549.1VP40GGGGAACAGUGCCGAUCUAUAGAUCGGCACUGUUCCCC6750.938479
NC_002549.1VP40CAUAUACCCUGUCAGGUCAUGACCUGACAGGGUAUAUG480.937519
NC_002549.1VP40CCAAGCAAUAAUGACUUCAUGAAGUCAUUAUUGCUUGG7110.935669
NC_002549.1VP40UGAUUUGACAGCACUCAAAUUUGAGUGCUGUCAAAUCA5220.934152
NC_002549.1VP40CCAUCAUGCUUGCUUCAUAUAUGAAGCAAGCAUGAUGG3410.930694
NC_002549.1VP40GCAUUCAUCCUUGAAGCUAUAGCUUCAAGGAUGAAUGC2140.927441
NC_002549.1VP40ACUCAAACUGAUCACCCAAUUGGGUGAUCAGUUUGAGU5340.926760
NC_002549.1VP40AGUGCUAAUGAAGCAAAUUAAUUUGCUUCAUUAGCACU2580.924325
NC_002549.1VP40ACGUGUCAUUCUCCUGCAAUUGCAGGAGAAUGACACGU9370.920765
NC_002549.1VP40CAACUACCCCAGUAUUUCAUGAAAUACUGGGGUAGUUG4990.920225
NC_002549.1VP40UUGAUUUGACAGCACUCAAUUGAGUGCUGUCAAAUCAA5210.918712
NC_002549.1VP40GAGAAAAUCCAAGCAAUAAUUAUUGCUUGGAUUUUCUC7030.917456
NC_002549.1VP40GGACUUUAAGAUCGUUCCAUGGAACGAUCUUAAAGUCC7350.915660
NC_002549.1VP40AGAAAAUCCAAGCAAUAAUAUUAUUGCUUGGAUUUUCU7040.914929
NC_002549.1VP40CAAUUGCUAGAGGUGGCAAUUGCCACCUCUAGCAAUUG740.913714
NC_002549.1VP40AAGUGCUAAUGAAGCAAAUAUUUGCUUCAUUAGCACUU2570.912623
NC_002549.1VP40AUAUACCCUGUCAGGUCAAUUGACCUGACAGGGUAUAU490.912219
NC_002549.1VP40CAAUUGAUCCAACCAAAAAUUUUUGGUUGGAUCAAUUG7520.910384
NC_002549.1VP40CUAGGUGUCGCUGAUCAAAUUUGAUCAGCGACACCUAG2920.910341
NC_002549.1VP40CACACACCAGGCAGUGUGUACACACUGCCUGGUGUGUG1900.903263
NC_002549.1VP40GGGAACAGUGCCGAUCUAAUUAGAUCGGCACUGUUCCC6760.902544
NC_002549.1VP40UCGCUGAUCAAAAGACCUAUAGGUCUUUUGAUCAGCGA2990.901723
NC_002549.1VP40UGACUUCUAAAAAUGGACAUGUCCAUUUUUAGAAGUCA8270.899851
NC_002549.1VP40GAAUUUCAUUUCAUCCAAAUUUGGAUGAAAUGAAAUUC6170.899755
NC_002549.1VP40CACUCAAACUGAUCACCCAUGGGUGAUCAGUUUGAGUG5330.897963
NC_002549.1VP40UCCAAUUUGGCUUCCUCUAUAGAGGAAGCCAAAUUGGA2760.895354
NC_002549.1VP40UCCAAUUGAUCCAACCAAAUUUGGUUGGAUCAAUUGGA7500.894180
NC_002549.1VP40AGUCAAUGGGGACACUCCAUGGAGUGUCCCCAUUGACU1230.892834
NC_002549.1VP40UCUAAAAAUGGACAACCAAUUGGUUGUCCAUUUUUAGA8320.892546
NC_002549.1VP40CUAACAUCUCCGGAGAAAAUUUUCUCCGGAGAUGUUAG6910.891181
NC_002549.1VP40AUGCUUGCUUCAUACACUAUAGUGUAUGAAGCAAGCAU3460.890476
NC_002549.1VP40GCGUCCAGGAAUUUCAUUUAAAUGAAAUUCCUGGACGC6090.890251
NC_002549.1VP40CAAAAGACCUACAGCUUUGCAAAGCUGUAGGUCUUUUG3070.888102
NC_002549.1VP40CGCUGAUCAAAAGACCUACGUAGGUCUUUUGAUCAGCG3000.885312
NC_002549.1VP40AAGCUAUGGUGAAUGUCAUAUGACAUUCACCAUAGCUU2270.884285
NC_002549.1VP40GGAGCGUUGCGUCCAGGAAUUCCUGGACGCAACGCUCC6010.883783
NC_002549.1VP40CCGGAGAAAAUCCAAGCAAUUGCUUGGAUUUUCUCCGG7000.883590
NC_002549.1VP40ACCCCAGUAUUUCACCUUUAAAGGUGAAAUACUGGGGU5040.882912
NC_002549.1VP40UCAAAAGACCUACAGCUUUAAAGCUGUAGGUCUUUUGA3060.881068
NC_002549.1VP40GUUGCGUCCAGGAAUUUCAUGAAAUUCCUGGACGCAAC6060.879638
NC_002549.1VP40AAGCAAUAAUGACUUCACUAGUGAAGUCAUUAUUGCUU7130.877918
NC_002549.1VP40UACCCUGUCAGGUCAAAUUAAUUUGACCUGACAGGGUA520.877467
NC_002549.1VP40GUCGCUGAUCAAAAGACCUAGGUCUUUUGAUCAGCGAC2980.876852
NC_002549.1VP40UACAGCUUUGACUCAACUAUAGUUGAGUCAAAGCUGUA3160.875184
NC_002549.1VP40CCAAUUGAUCCAACCAAAAUUUUGGUUGGAUCAAUUGG7510.875181
NC_002549.1VP40GUCCAGGAAUUUCAUUUCAUGAAAUGAAAUUCCUGGAC6110.874714
NC_002549.1VP40AGGUGUCGCUGAUCAAAAGCUUUUGAUCAGCGACACCU2940.874333
NC_002549.1VP40CAGUAUUUCACCUUUGAUUAAUCAAAGGUGAAAUACUG5080.874230
NC_002549.1VP40GAAGGGGAACAGUGCCGAUAUCGGCACUGUUCCCCUUC6720.874047
NC_002549.1VP40CUCUAGGUGUCGCUGAUCAUGAUCAGCGACACCUAGAG2900.869377
NC_002549.1VP40CUAUCACCCAUUUCGGCAAUUGCCGAAAUGGGUGAUAG3620.867881
NC_002549.1VP40CUACAGCUUUGACUCAACUAGUUGAGUCAAAGCUGUAG3150.867090
NC_002549.1VP40GAUCAAAAGACCUACAGCUAGCUGUAGGUCUUUUGAUC3040.866621
NC_002549.1VP40UGACAGCACUCAAACUGAUAUCAGUUUGAGUGCUGUCA5270.866383
NC_002549.1VP40GACUUCACUCCAGGACUUUAAAGUCCUGGAGUGAAGUC7230.866171
NC_002549.1VP40GAUCUAACAUCUCCGGAGAUCUCCGGAGAUGUUAGAUC6880.864243
NC_002549.1VP40CUGAAUAUAUGGAGGCCAUAUGGCCUCCAUAUAUUCAG320.863113
NC_002549.1VP40GAUCGUUCCAAUUGAUCCAUGGAUCAAUUGGAACGAUC7440.862144
NC_002549.1VP40GCUAUGGUGAAUGUCAUAUAUAUGACAUUCACCAUAGC2290.861955
NC_002549.1VP40GAGUCAGUCAAUGGGGACAUGUCCCCAUUGACUGACUC1180.861070
NC_002549.1VP40CCUUGAAGCUAUGGUGAAUAUUCACCAUAGCUUCAAGG2220.860465
NC_002549.1VP40CCAGUAUUUCACCUUUGAUAUCAAAGGUGAAAUACUGG5070.859858
NC_002549.1VP40GAAUAUAUGGAGGCCAUAUAUAUGGCCUCCAUAUAUUC340.858973
NC_002549.1VP40GACUUUAAGAUCGUUCCAAUUGGAACGAUCUUAAAGUC7360.858828
NC_002549.1VP40AGGAAUUUCAUUUCAUCCAUGGAUGAAAUGAAAUUCCU6150.858828
NC_002549.1VP40CUGACCGGUAAGAAGGUGAUCACCUUCUUACCGGUCAG8110.858051
NC_002549.1VP40CCUUUGAUUUGACAGCACUAGUGCUGUCAAAUCAAAGG5180.857165
NC_002549.1VP40UUGACAGCACUCAAACUGAUCAGUUUGAGUGCUGUCAA5260.856862
NC_002549.1VP40UAUACCCUGUCAGGUCAAAUUUGACCUGACAGGGUAUA500.855407
NC_002549.1VP40UAAUGACUUCACUCCAGGAUCCUGGAGUGAAGUCAUUA7190.855078
NC_002549.1VP40GCGUUGCGUCCAGGAAUUUAAAUUCCUGGACGCAACGC6040.854228
NC_002549.1VP40AAGGUGACUUCUAAAAAUGCAUUUUUAGAAGUCACCUU8230.853792
NC_002549.1VP40ACACCAGGCAGUGUGUCAUAUGACACACUGCCUGGUGU1930.852991
NC_002549.1VP40CGUUCUUCCGCCAGUCCAAUUGGACUGGCGGAAGAACG4830.852474
NC_002549.1VP40CCUACAGCUUUGACUCAACGUUGAGUCAAAGCUGUAGG3140.851178
NC_002549.1VP40GACCGGUAAGAAGGUGACUAGUCACCUUCUUACCGGUC8130.850472
NC_002549.1VP40CGGAGUCAGUCAAUGGGGAUCCCCAUUGACUGACUCCG1160.849930
NC_002549.1VP40AAAAGACCUACAGCUUUGAUCAAAGCUGUAGGUCUUUU3080.849477
NC_002549.1VP40CAAGCAAUAAUGACUUCACGUGAAGUCAUUAUUGCUUG7120.847932
NC_002549.1VP40CCAAUUUGGCUUCCUCUAGCUAGAGGAAGCCAAAUUGG2770.846325
NC_002549.1VP40AUCAAAAGACCUACAGCUUAAGCUGUAGGUCUUUUGAU3050.843587
NC_002549.1VP40UAGGUGUCGCUGAUCAAAAUUUUGAUCAGCGACACCUA2930.842746
NC_002549.1VP40GUCCAACUACCCCAGUAUUAAUACUGGGGUAGUUGGAC4960.839270
NC_002549.1VP40CCAGAAACUCUGGUCCACAUGUGGACCAGAGUUUCUGG7900.837733
NC_002549.1VP40CUGCCUGCUGCAACAUGGAUCCAUGUUGCAGCAGGCAG5560.836582
NC_002549.1VP40GAGGCCAUAUACCCUGUCAUGACAGGGUAUAUGGCCUC430.835534
NC_002549.1VP40CGGGUUAUAUUGCCUACUGCAGUAGGCAAUAUAACCCG70.834776
NC_002549.1VP40CGGCAAGGCAACCAAUCCAUGGAUUGGUUGCCUUGCCG3750.832259
NC_002549.1VP40ACAGCACUCAAACUGAUCAUGAUCAGUUUGAGUGCUGU5290.830680
NC_002549.1VP40CGCCAGUCCAACUACCCCAUGGGGUAGUUGGACUGGCG4910.830134
NC_002549.1VP40UCCUCUAGGUGUCGCUGAUAUCAGCGACACCUAGAGGA2880.826322
NC_002549.1VP40CCCCAGUAUUUCACCUUUGCAAAGGUGAAAUACUGGGG5050.825827
NC_002549.1VP40AAUCCAAGCAAUAAUGACUAGUCAUUAUUGCUUGGAUU7080.825735
NC_002549.1VP40CAGCUUUGACUCAACUACGCGUAGUUGAGUCAAAGCUG3180.825365
NC_002549.1VP40CACCUUUGAUUUGACAGCAUGCUGUCAAAUCAAAGGUG5160.822936
NC_002549.1VP40CCGGUAAGAAGGUGACUUCGAAGUCACCUUCUUACCGG8150.822426
NC_002549.1VP40CGCCAUCAUGCUUGCUUCAUGAAGCAAGCAUGAUGGCG3390.821393
NC_002549.1VP40GUGACUUCUAAAAAUGGACGUCCAUUUUUAGAAGUCAC8260.821342
NC_002549.1VP40ACUUUAAGAUCGUUCCAAUAUUGGAACGAUCUUAAAGU7370.820261
NC_002549.1VP40AAAGUGGGAAGAAGGGGAAUUCCCCUUCUUCCCACUUU6620.819737
NC_002549.1VP40ACCCAUUUCGGCAAGGCAAUUGCCUUGCCGAAAUGGGU3670.817008
NC_002549.1VP40UGACUUCACUCCAGGACUUAAGUCCUGGAGUGAAGUCA7220.815724
NC_002549.1VP40CCCCAAAGUGCUAAUGAAGCUUCAUUAGCACUUUGGGG2520.815511
NC_002549.1VP40AGCGUUGCGUCCAGGAAUUAAUUCCUGGACGCAACGCU6030.815222
NC_002549.1VP40AGUAUUUCACCUUUGAUUUAAAUCAAAGGUGAAAUACU5090.813005
NC_002549.1VP40AGCUUUGACUCAACUACGGCCGUAGUUGAGUCAAAGCU3190.810989
NC_002549.1VP40GACACGUGUCAUUCUCCUGCAGGAGAAUGACACGUGUC9340.809830
NC_002549.1VP40UAAUGAAGCAAAUUCCAAUAUUGGAAUUUGCUUCAUUA2630.809577
NC_002549.1VP40GUGUCAUUCUCCUGCAAGUACUUGCAGGAGAAUGACAC9390.808328
NC_002549.1VP40GUCAGUCAAUGGGGACACUAGUGUCCCCAUUGACUGAC1200.807691
NC_002549.1VP40GUUCCAAUUGAUCCAACCAUGGUUGGAUCAAUUGGAAC7480.805989
NC_002549.1VP40AGGUGACUUCUAAAAAUGGCCAUUUUUAGAAGUCACCU8240.805739
NC_002549.1VP40CCUCCAGGAGUUCGUUCUUAAGAACGAACUCCUGGAGG4710.805184
NC_002549.1VP40CGCCCCAUUCUUUUACCCAUGGGUAAAAGAAUGGGGCG6400.804874
NC_002549.1VP40CCAACAGGAUCAAAUGGAGCUCCAUUUGAUCCUGUUGG5860.804864
NC_002549.1VP40GGGAAGAAGGGGAACAGUGCACUGUUCCCCUUCUUCCC6670.804850
NC_002549.1VP40GUGCUAAUGAAGCAAAUUCGAAUUUGCUUCAUUAGCAC2590.803042
NC_002549.1VP40CAUGCUUGCUUCAUACACUAGUGUAUGAAGCAAGCAUG3450.801629
NC_002549.1VP40AGAAACUCUGGUCCACAAGCUUGUGGACCAGAGUUUCU7920.800191