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Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.
Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.
Result
StrainGenemRNAsiRNAPositionEfficacy
NC_002549.1VP40GAAGGUGACUUCUAAAAAUAUUUUUAGAAGUCACCUUC8221.097182
NC_002549.1VP40GUAAGAAGGUGACUUCUAAUUAGAAGUCACCUUCUUAC8181.058512
NC_002549.1VP40GGUAAGAAGGUGACUUCUAUAGAAGUCACCUUCUUACC8171.040837
NC_002549.1VP40AGAAGGUGACUUCUAAAAAUUUUUAGAAGUCACCUUCU8211.040128
NC_002549.1VP40CAAUAAUGACUUCACUCCAUGGAGUGAAGUCAUUAUUG7161.037400
NC_002549.1VP40CAAAGUGCUAAUGAAGCAAUUGCUUCAUUAGCACUUUG2551.028978
NC_002549.1VP40CAUUCAUCCUUGAAGCUAUAUAGCUUCAAGGAUGAAUG2151.024460
NC_002549.1VP40GGUGACUUCUAAAAAUGGAUCCAUUUUUAGAAGUCACC8251.019099
NC_002549.1VP40GACUUCUAAAAAUGGACAAUUGUCCAUUUUUAGAAGUC8281.013072
NC_002549.1VP40CUUCACUCCAGGACUUUAAUUAAAGUCCUGGAGUGAAG7251.008550
NC_002549.1VP40GCUGAUCAAAAGACCUACAUGUAGGUCUUUUGAUCAGC3011.006823
NC_002549.1VP40CCCAGUAUUUCACCUUUGAUCAAAGGUGAAAUACUGGG5060.994898
NC_002549.1VP40CGGAGAAAAUCCAAGCAAUAUUGCUUGGAUUUUCUCCG7010.992134
NC_002549.1VP40AAAGUGCUAAUGAAGCAAAUUUGCUUCAUUAGCACUUU2560.991974
NC_002549.1VP40AGCUAUGGUGAAUGUCAUAUAUGACAUUCACCAUAGCU2280.989547
NC_002549.1VP40CAGAAACUCUGGUCCACAAUUGUGGACCAGAGUUUCUG7910.985150
NC_002549.1VP40GGAAUUUCAUUUCAUCCAAUUGGAUGAAAUGAAAUUCC6160.984779
NC_002549.1VP40AAGAAGGUGACUUCUAAAAUUUUAGAAGUCACCUUCUU8200.980676
NC_002549.1VP40GAAGCUAUGGUGAAUGUCAUGACAUUCACCAUAGCUUC2260.976979
NC_002549.1VP40GCUAAUGAAGCAAAUUCCAUGGAAUUUGCUUCAUUAGC2610.974372
NC_002549.1VP40GGUGUCGCUGAUCAAAAGAUCUUUUGAUCAGCGACACC2950.973146
NC_002549.1VP40ACUUCACUCCAGGACUUUAUAAAGUCCUGGAGUGAAGU7240.972439
NC_002549.1VP40ACCUACAGCUUUGACUCAAUUGAGUCAAAGCUGUAGGU3130.971021
NC_002549.1VP40UAAGAAGGUGACUUCUAAAUUUAGAAGUCACCUUCUUA8190.966383
NC_002549.1VP40GGAGAAAAUCCAAGCAAUAUAUUGCUUGGAUUUUCUCC7020.960206
NC_002549.1VP40CCAAAGUGCUAAUGAAGCAUGCUUCAUUAGCACUUUGG2540.956379
NC_002549.1VP40CGGUAAGAAGGUGACUUCUAGAAGUCACCUUCUUACCG8160.950745
NC_002549.1VP40CUAAUGAAGCAAAUUCCAAUUGGAAUUUGCUUCAUUAG2620.950426
NC_002549.1VP40GACCUACAGCUUUGACUCAUGAGUCAAAGCUGUAGGUC3120.949694
NC_002549.1VP40CACACCAGGCAGUGUGUCAUGACACACUGCCUGGUGUG1920.948528
NC_002549.1VP40CUAAAAAUGGACAACCAAUAUUGGUUGUCCAUUUUUAG8330.939121
NC_002549.1VP40UCUAGGUGUCGCUGAUCAAUUGAUCAGCGACACCUAGA2910.938606
NC_002549.1VP40GGGGAACAGUGCCGAUCUAUAGAUCGGCACUGUUCCCC6750.938479
NC_002549.1VP40CAUAUACCCUGUCAGGUCAUGACCUGACAGGGUAUAUG480.937519
NC_002549.1VP40CCAAGCAAUAAUGACUUCAUGAAGUCAUUAUUGCUUGG7110.935669
NC_002549.1VP40UGAUUUGACAGCACUCAAAUUUGAGUGCUGUCAAAUCA5220.934152
NC_002549.1VP40CCAUCAUGCUUGCUUCAUAUAUGAAGCAAGCAUGAUGG3410.930694
NC_002549.1VP40GCAUUCAUCCUUGAAGCUAUAGCUUCAAGGAUGAAUGC2140.927441
NC_002549.1VP40ACUCAAACUGAUCACCCAAUUGGGUGAUCAGUUUGAGU5340.926760
NC_002549.1VP40AGUGCUAAUGAAGCAAAUUAAUUUGCUUCAUUAGCACU2580.924325
NC_002549.1VP40ACGUGUCAUUCUCCUGCAAUUGCAGGAGAAUGACACGU9370.920765
NC_002549.1VP40CAACUACCCCAGUAUUUCAUGAAAUACUGGGGUAGUUG4990.920225
NC_002549.1VP40UUGAUUUGACAGCACUCAAUUGAGUGCUGUCAAAUCAA5210.918712
NC_002549.1VP40GAGAAAAUCCAAGCAAUAAUUAUUGCUUGGAUUUUCUC7030.917456
NC_002549.1VP40GGACUUUAAGAUCGUUCCAUGGAACGAUCUUAAAGUCC7350.915660
NC_002549.1VP40AGAAAAUCCAAGCAAUAAUAUUAUUGCUUGGAUUUUCU7040.914929
NC_002549.1VP40CAAUUGCUAGAGGUGGCAAUUGCCACCUCUAGCAAUUG740.913714
NC_002549.1VP40AAGUGCUAAUGAAGCAAAUAUUUGCUUCAUUAGCACUU2570.912623
NC_002549.1VP40AUAUACCCUGUCAGGUCAAUUGACCUGACAGGGUAUAU490.912219
NC_002549.1VP40CAAUUGAUCCAACCAAAAAUUUUUGGUUGGAUCAAUUG7520.910384