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Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.
Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.
Result
StrainGenemRNAsiRNAPositionEfficacy
NC_014372.1VP40CAACUGGUGUGAUGACAAAUUUGUCAUCACACCAGUUG1131.079197
NC_014372.1VP40CCUACAAGAGUUUGUGCUAUAGCACAAACUCUUGUAGG4711.069467
NC_014372.1VP40GUUUGUGCUACCUCCUGUAUACAGGAGGUAGCACAAAC4801.027764
NC_014372.1VP40GACUCCUAAGAAUAGGAAAUUUCCUAUUCUUAGGAGUC4431.026973
NC_014372.1VP40CCAUUAUGCUAGCAUCAUAUAUGAUGCUAGCAUAAUGG3411.026418
NC_014372.1VP40GAAAGUGCUGAUGAAGCAAUUGCUUCAUCAGCACUUUC2551.022304
NC_014372.1VP40CAUUUAUAUUGGAAGCUAUAUAGCUUCCAAUAUAAAUG2151.020752
NC_014372.1VP40CCUAAGAAUAGGAAAUCAAUUGAUUUCCUAUUCUUAGG4471.018677
NC_014372.1VP40GCAUUUAUAUUGGAAGCUAUAGCUUCCAAUAUAAAUGC2141.017606
NC_014372.1VP40GAAGCUAUGGUGAAUGUAAUUACAUUCACCAUAGCUUC2261.010264
NC_014372.1VP40CCUACAAGACCUCAAAAUUAAUUUUGAGGUCUUGUAGG7291.010102
NC_014372.1VP40GGCUAUAAUGAAUUUCCUAUAGGAAAUUCAUUAUAGCC7141.009022
NC_014372.1VP40CGAAAGUGCUGAUGAAGCAUGCUUCAUCAGCACUUUCG2540.999207
NC_014372.1VP40CGACUCCUAAGAAUAGGAAUUCCUAUUCUUAGGAGUCG4420.997955
NC_014372.1VP40CAUUAUGCUAGCAUCAUAUAUAUGAUGCUAGCAUAAUG3420.997691
NC_014372.1VP40ACAAGACCUCAAAAUUGUAUACAAUUUUGAGGUCUUGU7320.996652
NC_014372.1VP40UGUGCUACCUCCUGUACAAUUGUACAGGAGGUAGCACA4830.996526
NC_014372.1VP40GGUGUGAUGACAAAUGAUAUAUCAUUUGUCAUCACACC1180.995212
NC_014372.1VP40ACAUAUAGCUUUGAUUCAAUUGAAUCAAAGCUAUAUGU3130.984501
NC_014372.1VP40CAACUACCAAGAAUGGUCAUGACCAUUCUUGGUAGUUG8270.983690
NC_014372.1VP40GGCUGUUUACCCAAUGAGAUCUCAUUGGGUAAACAGCC450.981029
NC_014372.1VP40CCAAGAAUGGUCAACCAAUAUUGGUUGACCAUUCUUGG8330.979033
NC_014372.1VP40GAGGCUGUUUACCCAAUGAUCAUUGGGUAAACAGCCUC430.972878
NC_014372.1VP40CUCUGCAUUUAUAUUGGAAUUCCAAUAUAAAUGCAGAG2100.971764
NC_014372.1VP40GAAUGGUCAACCAAUCAUUAAUGAUUGGUUGACCAUUC8370.970312
NC_014372.1VP40CAAAUGAUACUCCCUCUAAUUAGAGGGAGUAUCAUUUG1280.963419
NC_014372.1VP40CAAAAUUGUACCAAUCGAUAUCGAUUGGUACAAUUUUG7410.962988
NC_014372.1VP40GGUGCAGACAACACUGCCAUGGCAGUGUUGUCUGCACC760.961078
NC_014372.1VP40GCUGUUUACCCAAUGAGAAUUCUCAUUGGGUAAACAGC460.958569
NC_014372.1VP40GACAUAUAGCUUUGAUUCAUGAAUCAAAGCUAUAUGUC3120.958476
NC_014372.1VP40GCCCGAAAGUGCUGAUGAAUUCAUCAGCACUUUCGGGC2510.955884
NC_014372.1VP40CUAGCAUCAUAUACCAUCAUGAUGGUAUAUGAUGCUAG3490.954350
NC_014372.1VP40CUCUAAUUCACUCCGACCAUGGUCGGAGUGAAUUAGAG1410.954118
NC_014372.1VP40GGCUCCAACUCCGAUCUAAUUAGAUCGGAGUUGGAGCC6760.954034
NC_014372.1VP40AGUGUUGCCUCUGCAUUUAUAAAUGCAGAGGCAACACU2020.952564
NC_014372.1VP40AAAGUGCUGAUGAAGCAAAUUUGCUUCAUCAGCACUUU2560.950486
NC_014372.1VP40CUGGUGUGAUGACAAAUGAUCAUUUGUCAUCACACCAG1160.949642
NC_014372.1VP40CAUUUUGGCAAAACCUCAAUUGAGGUUUUGCCAAAAUG3700.948157
NC_014372.1VP40GAUAAUAUUGAUCAUCCGAUCGGAUGAUCAAUAUUAUC1690.947307
NC_014372.1VP40GGAAGCUAUGGUGAAUGUAUACAUUCACCAUAGCUUCC2250.947097
NC_014372.1VP40CAGUGUUGCCUCUGCAUUUAAAUGCAGAGGCAACACUG2010.946993
NC_014372.1VP40UUUCCUACAAGACCUCAAAUUUGAGGUCUUGUAGGAAA7260.945328
NC_014372.1VP40CCAGAAGACAUAUAGCUUUAAAGCUAUAUGUCUUCUGG3060.944127
NC_014372.1VP40UACAAGACCUCAAAAUUGUACAAUUUUGAGGUCUUGUA7310.943742
NC_014372.1VP40ACCAAGAAUGGUCAACCAAUUGGUUGACCAUUCUUGGU8320.943580
NC_014372.1VP40GCCAUUAUGCUAGCAUCAUAUGAUGCUAGCAUAAUGGC3400.942257
NC_014372.1VP40CUGACUGGGAAGAAGACAAUUGUCUUCUUCCCAGUCAG8110.941794
NC_014372.1VP40GGAUCUCAUUCCAUCCCAAUUGGGAUGGAAUGAGAUCC6170.938044
NC_014372.1VP40GGUGUCUCUGACCAGAAGAUCUUCUGGUCAGAGACACC2950.934758
NC_014372.1VP40AUUUCCUACAAGACCUCAAUUGAGGUCUUGUAGGAAAU7250.934021