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Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.
Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.
Result
StrainGenemRNAsiRNAPositionEfficacy
NC_006432.1VP40GGCUGUGAGUGGAAUUCAAUUGAAUUCCACUCACAGCC871.088666
NC_006432.1VP40CGGAAUUGCUGACCAAAAAUUUUUGGUCAGCAAUUCCG2941.065100
NC_006432.1VP40CCUUCAAGAGUUUGUGCUAUAGCACAAACUCUUGAAGG4711.056273
NC_006432.1VP40GCCUAUAAUUCCUGUCUUAUAAGACAGGAAUUAUAGGC8461.054536
NC_006432.1VP40CAGAAUUGCUGGUCCACAAUUGUGGACCAGCAAUUCUG7911.039945
NC_006432.1VP40GAGGCAACUGUCAAUGUGAUCACAUUGACAGUUGCCUC2261.027821
NC_006432.1VP40CAGACAAAAUUCAGACAAUAUUGUCUGAAUUUUGUCUG7011.026988
NC_006432.1VP40GACCUGUUGCUGAUGAUAAUUAUCAUCAGCAACAGGUC1551.021798
NC_006432.1VP40GGAAUUGCUGACCAAAAAAUUUUUUGGUCAGCAAUUCC2951.020248
NC_006432.1VP40CAAUUAUGCUCGCAUCUUAUAAGAUGCGAGCAUAAUUG3411.017639
NC_006432.1VP40GAAUGGAUACACCAUCAAAUUUGAUGGUGUAUCCAUUC1281.017289
NC_006432.1VP40CAGACAAUUGUGAACCUGAUCAGGUUCACAAUUGUCUG7121.005044
NC_006432.1VP40CGCAAUAUUUCACUUUUGAUCAAAAGUGAAAUAUUGCG5061.004425
NC_006432.1VP40AGGCAAGACGGGAAAGAAAUUUCUUUCCCGUCUUGCCU6571.001461
NC_006432.1VP40CAAGCUCACUGGGAAGAAAUUUCUUCCCAGUGAGCUUG8070.999637
NC_006432.1VP40CCUGAUGCAAGAUUUCAAAUUUGAAAUCUUGCAUCAGG7260.996609
NC_006432.1VP40UGUGCUACCACCAGUUCAAUUGAACUGGUGGUAGCACA4830.992034
NC_006432.1VP40GAUACACCAUCAAAUUCUAUAGAAUUUGAUGGUGUAUC1330.991188
NC_006432.1VP40AGACCUGACUAUGGUCAUAUAUGACCAUAGUCAGGUCU9030.983027
NC_006432.1VP40AGACAAAAUUCAGACAAUUAAUUGUCUGAAUUUUGUCU7020.981090
NC_006432.1VP40CAGAAGAAUGGACAGCCUAUAGGCUGUCCAUUCUUCUG8320.979044
NC_006432.1VP40CCAGACAAAAUUCAGACAAUUGUCUGAAUUUUGUCUGG7000.977325
NC_006432.1VP40ACCUGAUGCAAGAUUUCAAUUGAAAUCUUGCAUCAGGU7250.976000
NC_006432.1VP40ACGUACAGUUUUGACUCAAUUGAGUCAAAACUGUACGU3130.975625
NC_006432.1VP40GAGACCUGUUGCUGAUGAUAUCAUCAGCAACAGGUCUC1530.975363
NC_006432.1VP40ACUCGGAAUUGCUGACCAAUUGGUCAGCAAUUCCGAGU2910.975224
NC_006432.1VP40GAAUGGACAGCCUAUAAUUAAUUAUAGGCUGUCCAUUC8370.974046
NC_006432.1VP40GGAAUGGAUACACCAUCAAUUGAUGGUGUAUCCAUUCC1270.974026
NC_006432.1VP40AGACAAUUGUGAACCUGAUAUCAGGUUCACAAUUGUCU7130.971634
NC_006432.1VP40GACCUGACUAUGGUCAUAAUUAUGACCAUAGUCAGGUC9040.970832
NC_006432.1VP40GAAAAUGAGUCAGAAGAAUAUUCUUCUGACUCAUUUUC8220.965833
NC_006432.1VP40CUCGCAUCUUAUACGAUCAUGAUCGUAUAAGAUGCGAG3490.962333
NC_006432.1VP40GGCUUUCCUUCAAGAGUUUAAACUCUUGAAGGAAAGCC4650.958069
NC_006432.1VP40AGAGUUUGUGCUACCACCAUGGUGGUAGCACAAACUCU4770.953562
NC_006432.1VP40ACAAAAUUCAGACAAUUGUACAAUUGUCUGAAUUUUGU7040.951323
NC_006432.1VP40GAAGAAUGGACAGCCUAUAUAUAGGCUGUCCAUUCUUC8340.948849
NC_006432.1VP40GGAAGAAAAUGAGUCAGAAUUCUGACUCAUUUUCUUCC8180.947912
NC_006432.1VP40GCUGCAACAUGGACAGAUGCAUCUGUCCAUGUUGCAGC5620.944928
NC_006432.1VP40AGACCUGUUGCUGAUGAUAUAUCAUCAGCAACAGGUCU1540.944508
NC_006432.1VP40GUGAGUGGAAUUCAACAGAUCUGUUGAAUUCCACUCAC910.943047
NC_006432.1VP40CAAAGUCCUCAUGAAACAAUUGUUUCAUGAGGACUUUG2550.940865
NC_006432.1VP40CUGCAACAUGGACAGAUGAUCAUCUGUCCAUGUUGCAG5630.938835
NC_006432.1VP40GGGAAGAAAAUGAGUCAGAUCUGACUCAUUUUCUUCCC8170.938218
NC_006432.1VP40AGUUUGUGCUACCACCAGUACUGGUGGUAGCACAAACU4790.936491
NC_006432.1VP40GAACCAGGCUUUCCUUCAAUUGAAGGAAAGCCUGGUUC4590.933198
NC_006432.1VP40GCCGCAAUAUUUCACUUUUAAAAGUGAAAUAUUGCGGC5040.933157
NC_006432.1VP40GUUUGUGCUACCACCAGUUAACUGGUGGUAGCACAAAC4800.931500
NC_006432.1VP40AGAAGAAUGGACAGCCUAUAUAGGCUGUCCAUUCUUCU8330.931342
NC_006432.1VP40CAUCUUAUACGAUCACCCAUGGGUGAUCGUAUAAGAUG3530.930327
NC_006432.1VP40GAGACCUGACUAUGGUCAUAUGACCAUAGUCAGGUCUC9020.929619