Welcome to Home page of EbolaVCR



Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.
Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.
Result
StrainGenemRNAsiRNAPositionEfficacy
NC_004161.1VP40GAAGCUACAGUGAAUGUAAUUACAUUCACUGUAGCUUC2261.133364
NC_004161.1VP40GGACAUGCUUCAGACUUAAUUAAGUCUGAAGCAUGUCC6761.131273
NC_004161.1VP40GACCAAGUGUCAUAGUCAAUUGACUAUGACACUUGGUC771.125936
NC_004161.1VP40AGACAGGAAAGAAAGGACAUGUCCUUUCUUUCCUGUCU6621.081234
NC_004161.1VP40AGGACAUGCUUCAGACUUAUAAGUCUGAAGCAUGUCCU6751.061668
NC_004161.1VP40CAAUUAUGUUGGCUUCCUAUAGGAAGCCAACAUAAUUG3411.057767
NC_004161.1VP40CUGACAAGAUUCAAACAAUAUUGUUUGAAUCUUGUCAG7011.057548
NC_004161.1VP40CGACCAAGUGUCAUAGUCAUGACUAUGACACUUGGUCG761.038244
NC_004161.1VP40CAAGUGUCAUAGUCAAUGAUCAUUGACUAUGACACUUG801.022016
NC_004161.1VP40GGGGAAGACAGGAAAGAAAUUUCUUUCCUGUCUUCCCC6571.019970
NC_004161.1VP40GACAAGAUUCAAACAAUCAUGAUUGUUUGAAUCUUGUC7031.013401
NC_004161.1VP40GGAAAGAAAGGACAUGCUUAAGCAUGUCCUUUCUUUCC6671.011727
NC_004161.1VP40CAGACUUAACAUCACCUGAUCAGGUGAUGUUAAGUCUG6861.010391
NC_004161.1VP40CGAAAUAUGUUGGACUUGAUCAAGUCCAACAUAUUUCG8691.009429
NC_004161.1VP40GUAGCUGAUCAGAAGAUAUAUAUCUUCUGAUCAGCUAC2981.008396
NC_004161.1VP40GCCUUUAUAUUGGAAGCUAUAGCUUCCAAUAUAAAGGC2141.006945
NC_004161.1VP40GGAAGCUACAGUGAAUGUAUACAUUCACUGUAGCUUCC2251.004506
NC_004161.1VP40CCAGAAUUACUAGUUCAAAUUUGAACUAGUAAUUCUGG7901.004372
NC_004161.1VP40GGUGUAGCUGAUCAGAAGAUCUUCUGAUCAGCUACACC2950.999779
NC_004161.1VP40CCUCCAGCAUAUAAUGAUAUAUCAUUAUAUGCUGGAGG280.994574
NC_004161.1VP40GCAUAUAAUGAUAUUGCAUAUGCAAUAUCAUUAUAUGC340.994071
NC_004161.1VP40CCUGACAAGAUUCAAACAAUUGUUUGAAUCUUGUCAGG7000.992122
NC_004161.1VP40CGGCUCCUCCAGCAUAUAAUUAUAUGCUGGAGGAGCCG230.979259
NC_004161.1VP40CCUCAAAAUUGUCCCGAUUAAUCGGGACAAUUUUGAGG7380.977023
NC_004161.1VP40AUGCAAUACCGGACCUCAAUUGAGGUCCGGUAUUGCAU7250.970604
NC_004161.1VP40CCCAGUAUUUCACAUUUGAUCAAAUGUGAAAUACUGGG5060.969779
NC_004161.1VP40CGGAGUAGCUUCUGCCUUUAAAGGCAGAAGCUACUCCG2010.969128
NC_004161.1VP40CACCCAGGAUUGUGAUUCAUGAAUCACAAUCCUGGGUG9210.968997
NC_004161.1VP40GAUAACAUUGAUCACUCAAUUGAGUGAUCAAUGUUAUC1690.968460
NC_004161.1VP40GGCAUUCCUUCAAGAGUUUAAACUCUUGAAGGAAUGCC4650.967867
NC_004161.1VP40GACUCCUAAGGUUGGGCAAUUGCCCAACCUUAGGAGUC4430.965005
NC_004161.1VP40CUUUAUAUUGGAAGCUACAUGUAGCUUCCAAUAUAAAG2160.964685
NC_004161.1VP40CAAACAAUCAUGAAUGCAAUUGCAUUCAUGAUUGUUUG7120.964167
NC_004161.1VP40GACUUAACAUCACCUGACAUGUCAGGUGAUGUUAAGUC6880.964129
NC_004161.1VP40UCACCUGACAAGAUUCAAAUUUGAAUCUUGUCAGGUGA6970.963376
NC_004161.1VP40UCCAGAAUUACUAGUUCAAUUGAACUAGUAAUUCUGGA7890.962471
NC_004161.1VP40GGGCAGAUGUUCCAUCAAAUUUGAUGGAACAUCUGCCC1280.962015
NC_004161.1VP40CUCUAAAGCUCAUCACUCAUGAGUGAUGAGCUUUAGAG5330.961604
NC_004161.1VP40ACCAAGUGUCAUAGUCAAUAUUGACUAUGACACUUGGU780.957853
NC_004161.1VP40GACCAGUGGCUGAUGAUAAUUAUCAUCAGCCACUGGUC1550.954297
NC_004161.1VP40CUAACAGCUCUAAAGCUCAUGAGCUUUAGAGCUGUUAG5260.954233
NC_004161.1VP40CCUUCAAGAGUUUGUUCUUAAGAACAAACUCUUGAAGG4710.953512
NC_004161.1VP40GGAGUAGCUUCUGCCUUUAUAAAGGCAGAAGCUACUCC2020.949116
NC_004161.1VP40GAGUAGCUUCUGCCUUUAUAUAAAGGCAGAAGCUACUC2030.948480
NC_004161.1VP40CUAUGGUUAUCACCCAGGAUCCUGGGUGAUAACCAUAG9110.942945
NC_004161.1VP40AGCAUAUAAUGAUAUUGCAUGCAAUAUCAUUAUAUGCU330.941891
NC_004161.1VP40AAUUGAGGUUCCAGAAUUAUAAUUCUGGAACCUCAAUU7800.940276
NC_004161.1VP40GCUGAUCAGAAGAUAUACAUGUAUAUCUUCUGAUCAGC3010.939085
NC_004161.1VP40GAUAUUGCAUACCCUAUGAUCAUAGGGUAUGCAAUAUC430.936559
NC_004161.1VP40ACAAGAUUCAAACAAUCAUAUGAUUGUUUGAAUCUUGU7040.932870