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Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.
Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.
Result
StrainGenemRNAsiRNAPositionEfficacy
NC_014373.1VP40CAGACUAACUGGAAAGAAAUUUCUUUCCAGUUAGUCUG8071.110379
NC_014373.1VP40GGGUGUUGCUGAUCAAAAAUUUUUGAUCAGCAACACCC2941.095826
NC_014373.1VP40GAAAGAAAAUCACAACAAAUUUGUUGUGAUUUUCUUUC8181.084128
NC_014373.1VP40GGUGUUGCUGAUCAAAAAAUUUUUUGAUCAGCAACACC2951.070656
NC_014373.1VP40AGACUAACUGGAAAGAAAAUUUUCUUUCCAGUUAGUCU8081.069684
NC_014373.1VP40CUCUUGGUCCACAGACUAAUUAGUCUGUGGACCAAGAG7961.058332
NC_014373.1VP40GGCUUCUAAGAAUAGGAAAUUUCCUAUUCUUAGAAGCC4431.046393
NC_014373.1VP40GACCGGUCCUACAGGAAUAUAUUCCUGUAGGACCGGUC5881.037303
NC_014373.1VP40CGACCAAUUGCUGAUGAUAUAUCAUCAGCAAUUGGUCG1541.036087
NC_014373.1VP40CGGCUUCUAAGAAUAGGAAUUCCUAUUCUUAGAAGCCG4421.032740
NC_014373.1VP40GGCCGAAGGUACUAAUGAAUUCAUUAGUACCUUCGGCC2511.027692
NC_014373.1VP40GACCAAUUGCUGAUGAUAAUUAUCAUCAGCAAUUGGUC1551.019526
NC_014373.1VP40CUUUCUCCAAGACCUCAAAUUUGAGGUCUUGGAGAAAG7261.016970
NC_014373.1VP40CGAAGGUACUAAUGAAGCAUGCUUCAUUAGUACCUUCG2541.014840
NC_014373.1VP40ACAUAUAGUUUUGACUCAAUUGAGUCAAAACUAUAUGU3131.013689
NC_014373.1VP40GCGGCUUCUAAGAAUAGGAUCCUAUUCUUAGAAGCCGC4411.010270
NC_014373.1VP40CGGUCCUACAGGAAUACUUAAGUAUUCCUGUAGGACCG5911.003477
NC_014373.1VP40GGUCAACCAAUAAUUCCUAUAGGAAUUAUUGGUUGACC8410.998034
NC_014373.1VP40CUCUAAAGCUGAUCACUCAUGAGUGAUCAGCUUUAGAG5330.993691
NC_014373.1VP40GGUCAUCACUCAAGACUGUACAGUCUUGAGUGAUGACC9150.993642
NC_014373.1VP40AGUGUUUCAUCAGCCUUUAUAAAGGCUGAUGAAACACU2020.991319
NC_014373.1VP40AGAAAAUCACAACAAAAAAUUUUUUGUUGUGAUUUUCU8210.990651
NC_014373.1VP40GGAAAGAAAAUCACAACAAUUGUUGUGAUUUUCUUUCC8170.990162
NC_014373.1VP40CGGAUGUAAUGAUGAGUGAUCACUCAUCAUUACAUCCG1160.989209
NC_014373.1VP40GGAUCCAGCUCCGAUCUUAUAAGAUCGGAGCUGGAUCC6760.985826
NC_014373.1VP40GCUUCUAAGAAUAGGAAAUAUUUCCUAUUCUUAGAAGC4440.985407
NC_014373.1VP40GAGACCUCACAAUGGUCAUAUGACCAUUGUGAGGUCUC9020.979917
NC_014373.1VP40CAUCAGCCUUUAUACUCGAUCGAGUAUAAAGGCUGAUG2090.976815
NC_014373.1VP40GGAACUCUUGGUCCACAGAUCUGUGGACCAAGAGUUCC7920.976380
NC_014373.1VP40CGAUCAUCCAAGUCAUACAUGUAUGACUUGGAUGAUCG1770.975645
NC_014373.1VP40AGAACGGUUAGUACUAGUAUACUAGUACUAACCGUUCU610.972510
NC_014373.1VP40CUAACUGGAAAGAAAAUCAUGAUUUUCUUUCCAGUUAG8110.971353
NC_014373.1VP40CUUGGGUGUUGCUGAUCAAUUGAUCAGCAACACCCAAG2910.969552
NC_014373.1VP40CAGUGUUUCAUCAGCCUUUAAAGGCUGAUGAAACACUG2010.969156
NC_014373.1VP40ACUCUUGGUCCACAGACUAUAGUCUGUGGACCAAGAGU7950.963730
NC_014373.1VP40GUGUUUCAUCAGCCUUUAUAUAAAGGCUGAUGAAACAC2030.963212
NC_014373.1VP40CCAUCACUCACUUUGGCAAUUGCCAAAGUGAGUGAUGG3620.963202
NC_014373.1VP40GAAAAUCACAACAAAAAAUAUUUUUUGUUGUGAUUUUC8220.962550
NC_014373.1VP40AAAGAAAAUCACAACAAAAUUUUGUUGUGAUUUUCUUU8190.959756
NC_014373.1VP40GCACCGGAUGUAAUGAUGAUCAUCAUUACAUCCGGUGC1120.959677
NC_014373.1VP40ACUUUCUCCAAGACCUCAAUUGAGGUCUUGGAGAAAGU7250.959212
NC_014373.1VP40GGUCCACAGACUAACUGGAUCCAGUUAGUCUGUGGACC8010.958043
NC_014373.1VP40GACUCAACUACAGCUGCAAUUGCAGCUGUAGUUGAGUC3250.957873
NC_014373.1VP40UAGUUUUGACUCAACUACAUGUAGUUGAGUCAAAACUA3180.957446
NC_014373.1VP40CACUCAAGACUGUGACACUAGUGUCACAGUCUUGAGUG9210.957082
NC_014373.1VP40CAAUAAUUCCUAUUCUUCUAGAAGAAUAGGAAUUAUUG8480.956206
NC_014373.1VP40CCUUUAUACUCGAGGCAAUAUUGCCUCGAGUAUAAAGG2150.955788
NC_014373.1VP40CCUGAUAAAAUACAAGCAAUUGCUUGUAUUUUAUCAGG7000.954429
NC_014373.1VP40GAACGGUUAGUACUAGUAUAUACUAGUACUAACCGUUC620.952208
NC_014373.1VP40AAUAAUUCCUAUUCUUCUAUAGAAGAAUAGGAAUUAUU8490.949238