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Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.
Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.
Result
StrainGenemRNAsiRNAPositionEfficacy
NC_014372.1VP35CGAUUAGAGGCAAGAUUAAUUAAUCUUGCCUCUAAUCG5421.084024
NC_014372.1VP35AGUACCUAAGGAAGUUCAAUUGAACUUCCUUAGGUACU5761.058344
NC_014372.1VP35GCAAGCUAGGAAAAGACAAUUGUCUUUUCCUAGCUUGC7431.050000
NC_014372.1VP35GACAGUACCAGCUCACUAAUUAGUGAGCUGGUACUGUC6131.043585
NC_014372.1VP35GGAAGUUCAAGAAGCUUUUAAAAGCUUCUUGAACUUCC5851.043110
NC_014372.1VP35GGAUAAAGUACCUAAGGAAUUCCUUAGGUACUUUAUCC5701.040991
NC_014372.1VP35AGGAAGUUCAAGAAGCUUUAAAGCUUCUUGAACUUCCU5841.029652
NC_014372.1VP35GCUAGGAAAAGACAAUUCUAGAAUUGUCUUUUCCUAGC7471.028458
NC_014372.1VP35CCUUCAUUACCAAUCAGAAUUCUGAUUGGUAAUGAAGG341.028234
NC_014372.1VP35GUACCAGCUCACUAACAGAUCUGUUAGUGAGCUGGUAC6171.022567
NC_014372.1VP35GGAUCUCCGAACAAUUAAUAUUAAUUGUUCGGAGAUCC861.018986
NC_014372.1VP35GCGAUUAGAGGCAAGAUUAUAAUCUUGCCUCUAAUCGC5411.017965
NC_014372.1VP35CGGUUUGCAAUCACAAUUUAAAUUGUGAUUGCAAACCG2331.013624
NC_014372.1VP35CCAGGUAAUUUGCAAGCUAUAGCUUGCAAAUUACCUGG7321.011712
NC_014372.1VP35CAAGCUAGGAAAAGACAAUAUUGUCUUUUCCUAGCUUG7441.011448
NC_014372.1VP35GACGUUACACAAGCACUAAUUAGUGCUUGUGUAACGUC2561.010862
NC_014372.1VP35GGUUUGCAAUCACAAUUUUAAAAUUGUGAUUGCAAACC2341.009567
NC_014372.1VP35CAUGAAAUCUUCAACGACAUGUCGUUGAAGAUUUCAUG1241.007617
NC_014372.1VP35GAGAAUGGCUUAAAGCCAAUUGGCUUUAAGCCAUUCUC3461.003119
NC_014372.1VP35AAAUCUUCAACGACACUGAUCAGUGUCGUUGAAGAUUU1280.989451
NC_014372.1VP35AGACCGAUCCGGUUUGCAAUUGCAAACCGGAUCGGUCU2240.985402
NC_014372.1VP35GAUCCGGUUUGCAAUCACAUGUGAUUGCAAACCGGAUC2290.984719
NC_014372.1VP35AGACGUUACACAAGCACUAUAGUGCUUGUGUAACGUCU2550.983477
NC_014372.1VP35GGACAGUACCAGCUCACUAUAGUGAGCUGGUACUGUCC6120.983104
NC_014372.1VP35CUUCAUUACCAAUCAGAAAUUUCUGAUUGGUAAUGAAG350.982936
NC_014372.1VP35CAAGCAAGAGGAUAAAGUAUACUUUAUCCUCUUGCUUG5610.982139
NC_014372.1VP35GGGCUGCAGCAAUCAAUGAUCAUUGAUUGCUGCAGCCC140.980291
NC_014372.1VP35GCAAGAUUAACAAGCAAGAUCUUGCUUGUUAAUCUUGC5510.978666
NC_014372.1VP35AGGCAAGAUUAACAAGCAAUUGCUUGUUAAUCUUGCCU5490.977060
NC_014372.1VP35CUUAGAGUCUCUCGAACAAUUGUUCGAGAGACUCUAAG3120.976946
NC_014372.1VP35GAUCCUUCAUUACCAAUCAUGAUUGGUAAUGAAGGAUC310.975148
NC_014372.1VP35CAAGCACUAACAUCAUUAAUUAAUGAUGUUAGUGCUUG2650.974897
NC_014372.1VP35AAGUACCUAAGGAAGUUCAUGAACUUCCUUAGGUACUU5750.974202
NC_014372.1VP35GAUGGAUCUCCGAACAAUUAAUUGUUCGGAGAUCCAUC830.972885
NC_014372.1VP35AGCAAUCAAUGAUCCUUCAUGAAGGAUCAUUGAUUGCU210.970571
NC_014372.1VP35CGUUACACAAGCACUAACAUGUUAGUGCUUGUGUAACG2580.969936
NC_014372.1VP35GGAUGGAUCUCCGAACAAUAUUGUUCGGAGAUCCAUCC820.967324
NC_014372.1VP35AAGAGGAUAAAGUACCUAAUUAGGUACUUUAUCCUCUU5660.966456
NC_014372.1VP35GCAAAGGACCUACGAGACAUGUCUCGUAGGUCCUUUGC6640.963859
NC_014372.1VP35CGGUACAUGAAAUCUUCAAUUGAAGAUUUCAUGUACCG1190.963759
NC_014372.1VP35CCGGUUUGCAAUCACAAUUAAUUGUGAUUGCAAACCGG2320.963445
NC_014372.1VP35CACCUGGACCAUCACUUUAUAAAGUGAUGGUCCAGGUG5120.954196
NC_014372.1VP35AGAUUAACAAGCAAGAGGAUCCUCUUGCUUGUUAAUCU5540.951578
NC_014372.1VP35UGGAUCUCCGAACAAUUAAUUAAUUGUUCGGAGAUCCA850.950881
NC_014372.1VP35CAGGUAAUUUGCAAGCUAGCUAGCUUGCAAAUUACCUG7330.946364
NC_014372.1VP35UGCAAGCUAGGAAAAGACAUGUCUUUUCCUAGCUUGCA7420.946333
NC_014372.1VP35GGCUAAAGUCAUUUCUGCAUGCAGAAAUGACUUUAGCC3750.944752
NC_014372.1VP35GCAGCAAUCAAUGAUCCUUAAGGAUCAUUGAUUGCUGC190.942595
NC_014372.1VP35GACCGAUCCGGUUUGCAAUAUUGCAAACCGGAUCGGUC2250.942304
NC_014372.1VP35UAACCAAUGUCAUACAAAAUUUUGUAUGACAUUGGUUA2810.941590