Welcome to Home page of EbolaVCR



Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.
Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.
Result
StrainGenemRNAsiRNAPositionEfficacy
NC_006432.1VP35GCAAAAGAUCUCAAGGAAAUUUCCUUGAGAUCUUUUGC6281.086428
NC_006432.1VP35CGACCUUACAUUUCAGCAAUUGCUGAAAUGUAAGGUCG6131.070107
NC_006432.1VP35GGUUCCAGAAAGUGUCAAAUUUGACACUUUCUGGAACC5401.058052
NC_006432.1VP35GGAUAGGACUUAUAGACAUAUGUCUAUAAGUCCUAUCC91.036922
NC_006432.1VP35CAAUGCUAUUGAAUCACUAUAGUGAUUCAAUAGCAUUG2701.028243
NC_006432.1VP35UGUUGAUGUUGAAAACAAAUUUGUUUUCAACAUCAACA991.027923
NC_006432.1VP35GACCUUACAUUUCAGCAAAUUUGCUGAAAUGUAAGGUC6141.026557
NC_006432.1VP35GAUGUUGAAAACAAACCAAUUGGUUUGUUUUCAACAUC1031.015800
NC_006432.1VP35CAAAAGAUCUCAAGGAAAUAUUUCCUUGAGAUCUUUUG6291.013205
NC_006432.1VP35GAUGAUGCUAUUAAGGCUAUAGCCUUAAUAGCAUCAUC4991.011485
NC_006432.1VP35AGACAACACGUAAAAGUGAUCACUUUUACGUGUUGUCU1581.010921
NC_006432.1VP35AGGUCGAGUAACAACUCUUAAGAGUUGUUACUCGACCU2911.005938
NC_006432.1VP35AGAGGUGUUUGUUGAUGUUAACAUCAACAAACACCUCU901.003682
NC_006432.1VP35GUACGAGGAUGAUGCUAUUAAUAGCAUCAUCCUCGUAC4921.002677
NC_006432.1VP35CGCUAACAGAGGUGUUUGUACAAACACCUCUGUUAGCG830.997934
NC_006432.1VP35CAGUGUGCAUUAAUCCAGAUCUGGAUUAAUGCACACUG7870.996159
NC_006432.1VP35CGAUAACCAUUAUUAGUAAUUACUAAUAAUGGUUAUCG1310.992222
NC_006432.1VP35GCUAUUAAGGCUAAAUUGAUCAAUUUAGCCUUAAUAGC5050.991878
NC_006432.1VP35CAUCAGUUGGUGCAGGUUAUAACCUGCACCAACUGAUG6850.987225
NC_006432.1VP35GCUAACAGAGGUGUUUGUUAACAAACACCUCUGUUAGC840.984851
NC_006432.1VP35CUAUUAAGGCUAAAUUGAAUUCAAUUUAGCCUUAAUAG5060.984666
NC_006432.1VP35CGAGGAUGAUGCUAUUAAGCUUAAUAGCAUCAUCCUCG4950.978580
NC_006432.1VP35CGGGCGACCUUACAUUUCAUGAAAUGUAAGGUCGCCCG6090.977357
NC_006432.1VP35GGUGUUUGUUGAUGUUGAAUUCAACAUCAACAAACACC930.977163
NC_006432.1VP35GUGCCGAAAUGGUUGCAAAUUUGCAACCAUUUCGGCAC3710.975979
NC_006432.1VP35GAUAGAGGUUGGGUCUGUAUACAGACCCAACCUCUAUC9280.975465
NC_006432.1VP35AAGUGAUAAGCAAGUCCAAUUGGACUUGCUUAUCACUU1710.974567
NC_006432.1VP35UGGUUUUCUGAGCAAUUAAUUAAUUGCUCAGAAAACCA490.974313
NC_006432.1VP35AGUAAGAAUCCCAAGACAAUUGUCUUGGGAUUCUUACU1450.972902
NC_006432.1VP35GGAUGAUGCUAUUAAGGCUAGCCUUAAUAGCAUCAUCC4980.972543
NC_006432.1VP35CAUUAAUCCAGAUAACAAAUUUGUUAUCUGGAUUAAUG7940.970264
NC_006432.1VP35GACAACACGUAAAAGUGAUAUCACUUUUACGUGUUGUC1590.969072
NC_006432.1VP35GAACGGGAAGGUUCCAGAAUUCUGGAACCUUCCCGUUC5310.964588
NC_006432.1VP35UAUCCUAGACAUAAUUCAUAUGAAUUAUGUCUAGGAUA7290.961441
NC_006432.1VP35ACGUAAAAGUGAUAAGCAAUUGCUUAUCACUUUUACGU1650.958564
NC_006432.1VP35ACGAGGAUGAUGCUAUUAAUUAAUAGCAUCAUCCUCGU4940.957522
NC_006432.1VP35GGAAGGUUCCAGAAAGUGUACACUUUCUGGAACCUUCC5360.957447
NC_006432.1VP35CUGGUUUUCUGAGCAAUUAUAAUUGCUCAGAAAACCAG480.954847
NC_006432.1VP35CCCAGUGUGCAUUAAUCCAUGGAUUAAUGCACACUGGG7850.953556
NC_006432.1VP35GUGUGCAUUAAUCCAGAUAUAUCUGGAUUAAUGCACAC7890.951471
NC_006432.1VP35CGAAGUGUCUGGCUGGUUUAAACCAGCCAGACACUUCG360.949667
NC_006432.1VP35UAUUGACAGAAGAAGUCAAUUGACUUCUUCUGUCAAUA2090.949044
NC_006432.1VP35GCAAACCAAUGCUAUUGAAUUCAAUAGCAUUGGUUUGC2640.947103
NC_006432.1VP35GCAUUAAUCCAGAUAACAAUUGUUAUCUGGAUUAAUGC7930.945954
NC_006432.1VP35AGCAAAAGAUCUCAAGGAAUUCCUUGAGAUCUUUUGCU6270.945928
NC_006432.1VP35GCAAAAUUGGUAAGGAUAAUUAUCCUUACCAAUUUUGC7070.945570
NC_006432.1VP35GCAACAGAAGCAUAUUGGAUCCAAUAUGCUUCUGUUGC4390.943469
NC_006432.1VP35CAGAGGUGUUUGUUGAUGUACAUCAACAAACACCUCUG890.941243
NC_006432.1VP35GUCGAGUAACAACUCUUGAUCAAGAGUUGUUACUCGAC2930.938781
NC_006432.1VP35CAAGACAACACGUAAAAGUACUUUUACGUGUUGUCUUG1560.938410