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Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.
Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.
Result
StrainGenemRNAsiRNAPositionEfficacy
NC_004161.1VP35CGAAAUGGUUGCAAAAUAUAUAUUUUGCAACCAUUUCG3751.083231
NC_004161.1VP35CAAUGUGCACUCAUACAGAUCUGUAUGAGUGCACAUUG7871.048546
NC_004161.1VP35CAAGAACCUUGACAGUACAUGUACUGUCAAGGUUCUUG5671.047359
NC_004161.1VP35CACACUUGAGAGUAGCUUAUAAGCUACUCUCAAGUGUG3031.038724
NC_004161.1VP35GAGAAUGCGCUUAAAGGAAUUCCUUUAAGCGCAUUCUC4991.034359
NC_004161.1VP35GAGAGUAGCUUAAAGCCAAUUGGCUUUAAGCUACUCUC3101.033894
NC_004161.1VP35CAUUAACUAUGCUAGUGAAUUCACUAGCAUAGUUAAUG2331.029205
NC_004161.1VP35AGCUCAACAAGAACUUGUAUACAAGUUCUUGUUGAGCU1571.025537
NC_004161.1VP35AGAAUGCGCUUAAAGGAAAUUUCCUUUAAGCGCAUUCU5001.021920
NC_004161.1VP35GCUAAAGACCUGAAGGAGAUCUCCUUCAGGUCUUUAGC6281.013925
NC_004161.1VP35GAAUGCGCUUAAAGGAAAAUUUUCCUUUAAGCGCAUUC5011.013838
NC_004161.1VP35ACAAGAACUUGUACAAGUAUACUUGUACAAGUUCUUGU1631.003278
NC_004161.1VP35GGUUGGGUUUGUUUGUUUAUAAACAAACAAACCCAACC9340.998011
NC_004161.1VP35UGUACCAGAUGCUGUGCAAUUGCACAGCAUCUGGUACA5400.993898
NC_004161.1VP35AAUGGAAGUCCGACUCAAAUUUGAGUCGGACUUCCAUU1260.992513
NC_004161.1VP35CGACUCAAACCAUCAUCAAUUGAUGAUGGUUUGAGUCG1360.991184
NC_004161.1VP35GGAUUUCUGAGCAACUUAUAUAAGUUGCUCAGAAAUCC500.990735
NC_004161.1VP35AGAUGGUGACUCUCCCCAAUUGGGGAGAGUCACCAUCU7710.986407
NC_004161.1VP35AGCAACUUAUGACAGGUAAUUACCUGUCAUAAGUUGCU590.985176
NC_004161.1VP35CCAACUUGUUCAAGUGAUUAAUCACUUGAACAAGUUGG6870.981193
NC_004161.1VP35GACAGGUAAGAUUCCAGUAUACUGGAAUCUUACCUGUC690.980867
NC_004161.1VP35CGCUUAAAGGAAAAAUCGAUCGAUUUUUCCUUUAAGCG5060.980850
NC_004161.1VP35AAAUGGAAGUCCGACUCAAUUGAGUCGGACUUCCAUUU1250.979603
NC_004161.1VP35CCAUCAUCAAGGAGCUCAAUUGAGCUCCUUGAUGAUGG1450.979414
NC_004161.1VP35UGUGCACUCAUACAGAUAAUUAUCUGUAUGAGUGCACA7900.978451
NC_004161.1VP35ACACUUGAGAGUAGCUUAAUUAAGCUACUCUCAAGUGU3040.978273
NC_004161.1VP35GAAAGGAUAACAACCUUUUAAAAGGUUGUUAUCCUUUC7160.976459
NC_004161.1VP35GUGCCGAAAUGGUUGCAAAUUUGCAACCAUUUCGGCAC3710.975223
NC_004161.1VP35AAGGUUGAGGAUACAUUAAUUAAUGUAUCCUCAACCUU2200.973956
NC_004161.1VP35AGGCUUACAAGAACCUUGAUCAAGGUUCUUGUAAGCCU5600.971369
NC_004161.1VP35CGACUGGAUGGAUUUCUGAUCAGAAAUCCAUCCAGUCG410.970262
NC_004161.1VP35CACCAACUUGUUCAAGUGAUCACUUGAACAAGUUGGUG6850.967764
NC_004161.1VP35CCACGAGCAUGCCAAAAGAUCUUUUGGCAUGCUCGUGG8770.966037
NC_004161.1VP35GAAACGACUGGAUGGAUUUAAAUCCAUCCAGUCGUUUC370.962154
NC_004161.1VP35CCGAAAUGGUUGCAAAAUAUAUUUUGCAACCAUUUCGG3740.960321
NC_004161.1VP35GCUUAAAGGAAAAAUCGAUAUCGAUUUUUCCUUUAAGC5070.960244
NC_004161.1VP35GAUCUUCUAGUUAUGACAAUUGUCAUAACUAGAAGAUC3940.958255
NC_004161.1VP35CCCAAUGUGCACUCAUACAUGUAUGAGUGCACAUUGGG7850.956613
NC_004161.1VP35GCUGUGCAAGAGGCUUACAUGUAAGCCUCUUGCACAGC5500.956083
NC_004161.1VP35GGAAGUCCGACUCAAACCAUGGUUUGAGUCGGACUUCC1290.954365
NC_004161.1VP35CACUUGAGAGUAGCUUAAAUUUAAGCUACUCUCAAGUG3050.953698
NC_004161.1VP35AGAUCAAAUGGAAGUCCGAUCGGACUUCCAUUUGAUCU1200.953414
NC_004161.1VP35GAUGCUGUGCAAGAGGCUUAAGCCUCUUGCACAGCAUC5470.953222
NC_004161.1VP35GCUUAAAGCCAAUCCAAGAUCUUGGAUUGGCUUUAAGC3170.950213
NC_004161.1VP35CAAAUGGAAGUCCGACUCAUGAGUCGGACUUCCAUUUG1240.945922
NC_004161.1VP35CUUUCACCAACUUGUUCAAUUGAACAAGUUGGUGAAAG6810.944570
NC_004161.1VP35AAAGGUUGAGGAUACAUUAUAAUGUAUCCUCAACCUUU2190.944222
NC_004161.1VP35AUGUGCACUCAUACAGAUAUAUCUGUAUGAGUGCACAU7890.942891
NC_004161.1VP35AGAGUAGCUUAAAGCCAAUAUUGGCUUUAAGCUACUCU3110.941147
NC_004161.1VP35AGAGAAUGCGCUUAAAGGAUCCUUUAAGCGCAUUCUCU4980.941105