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Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.
Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.
Result
StrainGenemRNAsiRNAPositionEfficacy
NC_014373.1VP35GAUGCAAUCAGGACUAAAAUUUUAGUCCUGAUUGCAUC5381.094900
NC_014373.1VP35GCUACAAGACGGAAAAACAUGUUUUUCCGUCUUGUAGC9901.090848
NC_014373.1VP35GGAUGCAAUCAGGACUAAAUUUAGUCCUGAUUGCAUCC5371.077884
NC_014373.1VP35CGAUUACCGAUAUCUUCAAUUGAAGAUAUCGGUAAUCG1191.076021
NC_014373.1VP35CCCUGAUUCAGAUAACCAAUUGGUUAUCUGAAUCAGGG8301.074815
NC_014373.1VP35CCUGAUUCAGAUAACCAAAUUUGGUUAUCUGAAUCAGG8311.063295
NC_014373.1VP35CAAGAUUGUUUCUGCACUAUAGUGCAGAAACAAUCUUG3781.045881
NC_014373.1VP35AGGAUGCAAUCAGGACUAAUUAGUCCUGAUUGCAUCCU5361.043917
NC_014373.1VP35CUCACUUGAUGUAAUUCAUAUGAAUUACAUCAAGUGAG7651.042308
NC_014373.1VP35CGAUCCACUCCAAAAUCAAUUGAUUUUGGAGUGGAUCG1701.035046
NC_014373.1VP35GAGGUUGUGAAAAUGCUAAUUAGCAUUUUCACAACCUC2561.024753
NC_014373.1VP35ACCGAUAUCUUCAAUGAAAUUUCAUUGAAGAUAUCGGU1241.022270
NC_014373.1VP35AGGACAAUUCCUCACUUGAUCAAGUGAGGAAUUGUCCU7551.022106
NC_014373.1VP35CAGUGUCUGAGAUCACCAAUUGGUGAUCUCAGACACUG3621.021482
NC_014373.1VP35CCUUGUCGUACAAAAACAAUUGUUUUUGUACGACAAGG2851.020838
NC_014373.1VP35CCAGCUACAAGACGGAAAAUUUUCCGUCUUGUAGCUGG9871.017531
NC_014373.1VP35CGAUAUCUUCAAUGAAAUUAAUUUCAUUGAAGAUAUCG1261.017148
NC_014373.1VP35GCAUAUUCCAGCUACAAGAUCUUGUAGCUGGAAUAUGC9801.012342
NC_014373.1VP35AGAGGUUGUGAAAAUGCUAUAGCAUUUUCACAACCUCU2551.009495
NC_014373.1VP35GAUCCACUCCAAAAUCAAAUUUGAUUUUGGAGUGGAUC1711.006730
NC_014373.1VP35GGACAAUUCCUCACUUGAUAUCAAGUGAGGAAUUGUCC7561.006568
NC_014373.1VP35GCAAGAUUCCGAUUACCGAUCGGUAAUCGGAAUCUUGC1101.005516
NC_014373.1VP35CCAAAGGCGUGUCAAAAGAUCUUUUGACACGCCUUUGG9131.002550
NC_014373.1VP35CCAAGUGUUCAAACACGCAUGCGUGUUUGAACACUUGG1930.991849
NC_014373.1VP35CUUGUCGUACAAAAACAAAUUUGUUUUUGUACGACAAG2860.991490
NC_014373.1VP35ACGGAUUCCUAUUUUCCAAUUGGAAAAUAGGAAUCCGU8490.991426
NC_014373.1VP35GAGGAUGCAAUCAGGACUAUAGUCCUGAUUGCAUCCUC5350.990090
NC_014373.1VP35CAAUGAAAUUGAAACCUUAUAAGGUUUCAAUUUCAUUG1350.987709
NC_014373.1VP35GCAAAAGACUUGCGCAAUAUAUUGCGCAAGUCUUUUGC6640.985164
NC_014373.1VP35CGCAGUGUCCAGACCCAAAUUUGGGUCUGGACACUGCG2080.984000
NC_014373.1VP35CCGAUUACCGAUAUCUUCAUGAAGAUAUCGGUAAUCGG1180.982007
NC_014373.1VP35GAUUACCGAUAUCUUCAAUAUUGAAGAUAUCGGUAAUC1200.981866
NC_014373.1VP35GGUUGUGAAAAUGCUAACAUGUUAGCAUUUUCACAACC2580.979140
NC_014373.1VP35GAAACCUUACCUAGUAUAAUUAUACUAGGUAAGGUUUC1450.979083
NC_014373.1VP35CCGAUAUCUUCAAUGAAAUAUUUCAUUGAAGAUAUCGG1250.973805
NC_014373.1VP35GUCCCUCGAUCCACUCCAAUUGGAGUGGAUCGAGGGAC1640.970144
NC_014373.1VP35CAGCUACAAGACGGAAAAAUUUUUCCGUCUUGUAGCUG9880.970060
NC_014373.1VP35ACAGAGCAAGGGUGACUUAUAAGUCACCCUUGCUCUGU110.965335
NC_014373.1VP35AGCAAUUGAUGACAGGCAAUUGCCUGUCAUCAAUUGCU950.963159
NC_014373.1VP35GAAGGACAAUUCCUCACUUAAGUGAGGAAUUGUCCUUC7530.961358
NC_014373.1VP35GUGCAGAGAUGGUGGCCAAUUGGCCACCAUCUCUGCAC4070.961206
NC_014373.1VP35CAAAAGACUUGCGCAAUAUAUAUUGCGCAAGUCUUUUG6650.959896
NC_014373.1VP35CCUCACUUGAUGUAAUUCAUGAAUUACAUCAAGUGAGG7640.959864
NC_014373.1VP35GUCUGAGAUCACCAAGAUUAAUCUUGGUGAUCUCAGAC3660.959501
NC_014373.1VP35GCAAUAUCAUGUAUGAUCAUGAUCAUACAUGAUAUUGC6770.959321
NC_014373.1VP35CAAGAUUCCGAUUACCGAUAUCGGUAAUCGGAAUCUUG1110.956951
NC_014373.1VP35GUGUCCAGACCCAAACUGAUCAGUUUGGGUCUGGACAC2120.954870
NC_014373.1VP35AGGUUUUGGCACAGCAUUUAAAUGCUGUGCCAAAACCU7020.954471
NC_014373.1VP35GAGAUCACCAAGAUUGUUUAAACAAUCUUGGUGAUCUC3700.953619
NC_014373.1VP35CUUGCGCAAUAUCAUGUAUAUACAUGAUAUUGCGCAAG6720.953221