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Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.
Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.
Result
StrainGenemRNAsiRNAPositionEfficacy
NC_004161.1VP30AAGACUUCUCACAAGGUAAUUACCUUGUGAGAAGUCUU3951.100493
NC_004161.1VP30GGUAAUAGUCCUAAAUUAAUUAAUUUAGGACUAUUACC4091.096527
NC_004161.1VP30GACCGACAGUCAUUAAUAAUUAUUAAUGACUGUCGGUC6911.082217
NC_004161.1VP30GCAAAUUGAGGACUCUAAAUUUAGAGUCCUCAAUUUGC4801.058774
NC_004161.1VP30CUAGCAACAUGCGACAUAAUUAUGUCGCAUGUUGCUAG291.057209
NC_004161.1VP30GGCAAAUUGAGGACUCUAAUUAGAGUCCUCAAUUUGCC4791.056885
NC_004161.1VP30GACAGUCAUUAAUAAUGUUAACAUUAUUAAUGACUGUC6951.054975
NC_004161.1VP30GAAGACUUCUCACAAGGUAUACCUUGUGAGAAGUCUUC3941.050198
NC_004161.1VP30CACCAAUUGGAUAGCUUAAUUAAGCUAUCCAAUUGGUG2681.048739
NC_004161.1VP30GGACCAAGCUGAUUCUGUAUACAGAAUCAGCUUGGUCC6031.044797
NC_004161.1VP30GCUAAUUGCAAGAAGAACAUGUUCUUCUUGCAAUUAGC3061.034989
NC_004161.1VP30ACAAGGUAAUAGUCCUAAAUUUAGGACUAUUACCUUGU4051.033485
NC_004161.1VP30AGGUAAUAGUCCUAAAUUAUAAUUUAGGACUAUUACCU4081.027833
NC_004161.1VP30CCUCUGCGAUAGCAAAUUUAAAUUUGCUAUCGCAGAGG2371.024995
NC_004161.1VP30GGACCGACAGUCAUUAAUAUAUUAAUGACUGUCGGUCC6901.023455
NC_004161.1VP30ACUGCUAAUUGCAAGAAGAUCUUCUUGCAAUUAGCAGU3031.020419
NC_004161.1VP30CGACAGUCAUUAAUAAUGUACAUUAUUAAUGACUGUCG6941.016027
NC_004161.1VP30GAUUCCUCUGCGAUAGCAAUUGCUAUCGCAGAGGAAUC2331.015768
NC_004161.1VP30CCAGCACAAGACAAUUCUAUAGAAUUGUCUUGUGCUGG7961.010623
NC_004161.1VP30GUAUUAGAGGUCUACCAAAUUUGGUAGACCUCUAAUAC6191.008148
NC_004161.1VP30CAGUCAUUAAUAAUGUUCAUGAACAUUAUUAAUGACUG6971.000218
NC_004161.1VP30AGACUUCUCACAAGGUAAUAUUACCUUGUGAGAAGUCU3960.997308
NC_004161.1VP30GACUUCUCACAAGGUAAUAUAUUACCUUGUGAGAAGUC3970.993664
NC_004161.1VP30CUGCUAAUUGCAAGAAGAAUUCUUCUUGCAAUUAGCAG3040.993292
NC_004161.1VP30CUCUGCGAUAGCAAAUUUUAAAAUUUGCUAUCGCAGAG2380.988624
NC_004161.1VP30CAAAGACUCCACAGUGAUAUAUCACUGUGGAGUCUUUG6340.987280
NC_004161.1VP30AGCUGAAGACUUCUCACAAUUGUGAGAAGUCUUCAGCU3900.986180
NC_004161.1VP30CGAUAGCAAAUUUUGCAAAUUUGCAAAAUUUGCUAUCG2430.977329
NC_004161.1VP30GCGAUAGCAAAUUUUGCAAUUGCAAAAUUUGCUAUCGC2420.977248
NC_004161.1VP30UCACCAAUUGGAUAGCUUAUAAGCUAUCCAAUUGGUGA2670.973586
NC_004161.1VP30CAUGAAUUACUACUGCUAAUUAGCAGUAGUAAUUCAUG2920.972877
NC_004161.1VP30AAGACUCCACAGUGAUAAAUUUAUCACUGUGGAGUCUU6360.971402
NC_004161.1VP30GGAUAGCUUAAAUGAUCAUAUGAUCAUUUAAGCUAUCC2760.969491
NC_004161.1VP30GCAAAUUUUGCAAAAAAGAUCUUUUUUGCAAAAUUUGC2480.963078
NC_004161.1VP30CACAAGGUAAUAGUCCUAAUUAGGACUAUUACCUUGUG4040.961696
NC_004161.1VP30CAACAUUGCUCUCCAGAUAUAUCUGGAGAGCAAUGUUG7290.960608
NC_004161.1VP30AGAGCUCUUUUAACCCUUUAAAGGGUUAAAAGAGCUCU5020.957344
NC_004161.1VP30GCGGUUAGCGAAUCCAACAUGUUGGAUUCGCUAACCGC3720.956022
NC_004161.1VP30UGUAUUAGAGGUCUACCAAUUGGUAGACCUCUAAUACA6180.955795
NC_004161.1VP30CAUUGUACCCAGCACAAGAUCUUGUGCUGGGUACAAUG7880.955358
NC_004161.1VP30CCAACACUCAAAAAAGGAUAUCCUUUUUUGAGUGUUGG2170.955335
NC_004161.1VP30AUGCGGUUAGCGAAUCCAAUUGGAUUCGCUAACCGCAU3700.954306
NC_004161.1VP30GCAAGAAGAACAUGUGGAAUUCCACAUGUUCUUCUUGC3130.952759
NC_004161.1VP30AGUCAUUAAUAAUGUUCAUAUGAACAUUAUUAAUGACU6980.951986
NC_004161.1VP30GAGAGCAAUUCGCAGAUUAUAAUCUGCGAAUUGCUCUC3370.951671
NC_004161.1VP30AGCACAAGACAAUUCUACAUGUAGAAUUGUCUUGUGCU7980.951359
NC_004161.1VP30CAAGGUAAUAGUCCUAAAUAUUUAGGACUAUUACCUUG4060.948245
NC_004161.1VP30CAAUGGGACCGACAGUCAUAUGACUGUCGGUCCCAUUG6850.947796
NC_004161.1VP30AGAUAUGCGGUUAGCGAAUAUUCGCUAACCGCAUAUCU3660.945331
NC_004161.1VP30AUUCCUCUGCGAUAGCAAAUUUGCUAUCGCAGAGGAAU2340.945075