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Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.
Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.
Result
StrainGenemRNAsiRNAPositionEfficacy
NC_014373.1VP30GAGUCAUCAAGUAAGAACAUGUUCUUACUUGAUGACUC631.074586
NC_014373.1VP30CAUUGAUGACUCAAGACUAUAGUCUUGAGUCAUCAAUG4831.071880
NC_014373.1VP30CCAUCAACUAGAAAGUUUAUAAACUUUCUAGUUGAUGG2671.057821
NC_014373.1VP30GAAGAUACCGAGACCUCAAUUGAGGUCUCGGUAUCUUC8051.039388
NC_014373.1VP30GGAGUAUUGGUCAAAACAAUUGUUUUGACCAAUACUCC4531.034217
NC_014373.1VP30CGACUGUGUUUCAUCGGAAUUCCGAUGAAACACAGUCG1521.032716
NC_014373.1VP30GUGUAUCAGCGCUUACAUAUAUGUAAGCGCUGAUACAC6281.031853
NC_014373.1VP30AUUGAUGACUCAAGACUAAUUAGUCUUGAGUCAUCAAU4841.028897
NC_014373.1VP30GCGCUUACAUAGCGACAAAUUUGUCGCUAUGUAAGCGC6361.027642
NC_014373.1VP30GACAGUCCUUGAUCAUGUUAACAUGAUCAAGGACUGUC6951.022467
NC_014373.1VP30GACGAGGAAAUUCUCAAAAUUUUGAGAAUUUCCUCGUC5311.022158
NC_014373.1VP30UGACGAGGAAAUUCUCAAAUUUGAGAAUUUCCUCGUCA5301.022086
NC_014373.1VP30GAUUUUUGUGUGACAGCAAUUGCUGUCACACAAAAAUC2331.019152
NC_014373.1VP30GAGUCCCGACUGUGUUUCAUGAAACACAGUCGGGACUC1461.011161
NC_014373.1VP30GACUCAAGACUAAGAGCAUAUGCUCUUAGUCUUGAGUC4901.010351
NC_014373.1VP30GCAGAUGAUUUCCAACAAAUUUGUUGGAAAUCAUCUGC3911.008246
NC_014373.1VP30GCUAGUGCCUCAAUCAGAAUUCUGAUUGAGGCACUAGC7891.007672
NC_014373.1VP30AGAAGAUACCGAGACCUCAUGAGGUCUCGGUAUCUUCU8041.005636
NC_014373.1VP30AGUCCUUGAUCAUGUUUAUAUAAACAUGAUCAAGGACU6981.005632
NC_014373.1VP30CGGAGUAUUGGUCAAAACAUGUUUUGACCAAUACUCCG4521.000939
NC_014373.1VP30CAAUCAGAAGAUACCGAGAUCUCGGUAUCUUCUGAUUG7991.000401
NC_014373.1VP30GAACAUCACUGCUCCUAAAUUUAGGAGCAGUGAUGUUC3480.998889
NC_014373.1VP30CAGAUGAUUUCCAACAAAAUUUUGUUGGAAAUCAUCUG3920.998529
NC_014373.1VP30GGGCCGAGUCAUCAAGUAAUUACUUGAUGACUCGGCCC580.996742
NC_014373.1VP30CAUCAACUAGAAAGUUUAAUUAAACUUUCUAGUUGAUG2680.996369
NC_014373.1VP30GCUCCUAAAGAUACACGAUAUCGUGUAUCUUUAGGAGC3580.988783
NC_014373.1VP30ACACGAUUAGCAAAUCCAAUUGGAUUUGCUAAUCGUGU3700.985989
NC_014373.1VP30GUGCCUCAAUCAGAAGAUAUAUCUUCUGAUUGAGGCAC7930.984415
NC_014373.1VP30ACUGCGGAGUAUUGGUCAAUUGACCAAUACUCCGCAGU4480.983956
NC_014373.1VP30GCCGAGUCAUCAAGUAAGAUCUUACUUGAUGACUCGGC600.979936
NC_014373.1VP30CUACCUUAAGGAAAGGAUUAAUCCUUUCCUUAAGGUAG2180.975594
NC_014373.1VP30CAGUCCUUGAUCAUGUUUAUAAACAUGAUCAAGGACUG6970.974677
NC_014373.1VP30ACGAGGAAAUUCUCAAAAUAUUUUGAGAAUUUCCUCGU5320.974067
NC_014373.1VP30AGAUCAUCCUCCAGAGACAUGUCUCUGGAGGAUGAUCU820.974034
NC_014373.1VP30UGAUGACUCAAGACUAAGAUCUUAGUCUUGAGUCAUCA4860.972047
NC_014373.1VP30AGAUGAUUUCCAACAAAAAUUUUUGUUGGAAAUCAUCU3930.971755
NC_014373.1VP30GCUGCUAGUGCCUCAAUCAUGAUUGAGGCACUAGCAGC7860.971696
NC_014373.1VP30AGACUAAGAGCAUUACUAAUUAGUAAUGCUCUUAGUCU4960.969164
NC_014373.1VP30CAGCGAAUAUCAUACACCUAGGUGUAUGAUAUUCGCUG1080.967115
NC_014373.1VP30GGAAAUUCUCAAAAUCCCAUGGGAUUUUGAGAAUUUCC5360.965883
NC_014373.1VP30CACGAUUAGCAAAUCCAAUAUUGGAUUUGCUAAUCGUG3710.963734
NC_014373.1VP30AGUCAUCAAGUAAGAACAAUUGUUCUUACUUGAUGACU640.959325
NC_014373.1VP30GACCGACAGUCCUUGAUCAUGAUCAAGGACUGUCGGUC6910.958004
NC_014373.1VP30GAGUAUUGGUCAAAACAAGCUUGUUUUGACCAAUACUC4540.957755
NC_014373.1VP30CUCAAGACUAAGAGCAUUAUAAUGCUCUUAGUCUUGAG4920.956117
NC_014373.1VP30GAUCAUGUUUAUAACAGCAUGCUGUUAUAAACAUGAUC7050.955524
NC_014373.1VP30CACUGCUCCUAAAGAUACAUGUAUCUUUAGGAGCAGUG3540.948634
NC_014373.1VP30GGAAAGGAUUUUUGUGUGAUCACACAAAAAUCCUUUCC2270.948078
NC_014373.1VP30CGGCUCCCUUGAACAACAAUUGUUGUUCAAGGGAGCCG3270.947945
NC_014373.1VP30CCGACUGUGUUUCAUCGGAUCCGAUGAAACACAGUCGG1510.946780