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Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.
Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.
Result
StrainGenemRNAsiRNAPositionEfficacy
NC_002549.1VP24CGACACGAAUGCAAAGUUUAAACUUUGCAUUCGUGUCG7041.137722
NC_002549.1VP24GAUGUGACUCACAAAGGAAUUCCUUUGUGAGUCACAUC1421.110742
NC_002549.1VP24GAAUCUCUUUCCUCAUUUAUAAAUGAGGAAAGAGAUUC2191.103698
NC_002549.1VP24AGUUUGAUGUGACUCACAAUUGUGAGUCACAUCAAACU1371.097074
NC_002549.1VP24CGACCUCUGUAACUUCUUAUAAGAAGUUACAGAGGUCG721.084534
NC_002549.1VP24GUUUGAUGUGACUCACAAAUUUGUGAGUCACAUCAAAC1381.061108
NC_002549.1VP24GGACGAUACAAUCUAAUAUAUAUUAGAUUGUAUCGUCC161.060196
NC_002549.1VP24ACGGGACGAUACAAUCUAAUUAGAUUGUAUCGUCCCGU131.055782
NC_002549.1VP24GGGACGAUACAAUCUAAUAUAUUAGAUUGUAUCGUCCC151.030156
NC_002549.1VP24CGAAAUUUUCCCUCCUUCAUGAAGGAGGGAAAAUUUCG6501.028097
NC_002549.1VP24CCUAUUGCAUAGACUGAAAUUUCAGUCUAUGCAAUAGG1651.024315
NC_002549.1VP24CAUGGUCAAUGACAAGGAAUUCCUUGUCAUUGACCAUG2031.020175
NC_002549.1VP24CGUUGAUUCGAUCCAAUAUAUAUUGGAUCGAAUCAACG4521.013424
NC_002549.1VP24CUCUGUAACUUCUUAGUUAUAACUAAGAAGUUACAGAG761.006646
NC_002549.1VP24CGGAUUGUUGAGCAGUAUUAAUACUGCUCAACAAUCCG5191.005707
NC_002549.1VP24AACACAACGUGUCAAGGAAUUCCUUGACACGUUGUGUU4111.002637
NC_002549.1VP24CGUGUCAAGGAACAAUUGAUCAAUUGUUCCUUGACACG4181.000400
NC_002549.1VP24CAACGUGUCAAGGAACAAUAUUGUUCCUUGACACGUUG4151.000054
NC_002549.1VP24GGUUGUCUUAAGCGACCUCGAGGUCGCUUAAGACAACC600.998640
NC_002549.1VP24GUCUUAAGCGACCUCUGUAUACAGAGGUCGCUUAAGAC640.992808
NC_002549.1VP24UGCAUAGACUGAAAACUAAUUAGUUUUCAGUCUAUGCA1700.988782
NC_002549.1VP24ACACGAAUGCAAAGUUUGAUCAAACUUUGCAUUCGUGU7060.984079
NC_002549.1VP24UCCUCGACACGAAUGCAAAUUUGCAUUCGUGUCGAGGA7000.980553
NC_002549.1VP24GCAUGGUCAAUGACAAGGAUCCUUGUCAUUGACCAUGC2020.978912
NC_002549.1VP24CAAUAUUCUCAAGUUUAUUAAUAAACUUGAGAAUAUUG4650.976301
NC_002549.1VP24GCUCCAAGAACCCGACAAAUUUGUCGGGUUCUUGGAGC6000.975754
NC_002549.1VP24CACAACGUGUCAAGGAACAUGUUCCUUGACACGUUGUG4130.974731
NC_002549.1VP24UGAUGUGACUCACAAAGGAUCCUUUGUGAGUCACAUCA1410.972977
NC_002549.1VP24CGGGACGAUACAAUCUAAUAUUAGAUUGUAUCGUCCCG140.970646
NC_002549.1VP24GACACGAAUGCAAAGUUUGCAAACUUUGCAUUCGUGUC7050.970248
NC_002549.1VP24CAAUGACAAGGAAUCUCUUAAGAGAUUCCUUGUCAUUG2090.970079
NC_002549.1VP24CAAAUUGGAUGCUCUACAUAUGUAGAGCAUCCAAUUUG4860.966960
NC_002549.1VP24GAGUUUGAUGUGACUCACAUGUGAGUCACAUCAAACUC1360.965907
NC_002549.1VP24GCAAAGUUUGAUUCUUGAAUUCAAGAAUCAAACUUUGC7140.965763
NC_002549.1VP24ACAACGUGUCAAGGAACAAUUGUUCCUUGACACGUUGU4140.964397
NC_002549.1VP24GGCGAAAUUUUCCCUCCUUAAGGAGGGAAAAUUUCGCC6480.963657
NC_002549.1VP24CAAGGAAUCUCUUUCCUCAUGAGGAAAGAGAUUCCUUG2150.963223
NC_002549.1VP24GAGCAGUAUUGAAAUUGGAUCCAAUUUCAAUACUGCUC5280.957942
NC_002549.1VP24GAUCCAAUAUUCUCAAGUUAACUUGAGAAUAUUGGAUC4610.956722
NC_002549.1VP24GCCCUAUUGCAUAGACUGAUCAGUCUAUGCAAUAGGGC1630.955248
NC_002549.1VP24UCUCAAGUUUAUUAACAAAUUUGUUAAUAAACUUGAGA4710.954380
NC_002549.1VP24CUUUCCUCAUUUAUUUCAAUUGAAAUAAAUGAGGAAAG2250.953425
NC_002549.1VP24GGGUUGUCUUAAGCGACCUAGGUCGCUUAAGACAACCC590.951450
NC_002549.1VP24UCUUAAGCGACCUCUGUAAUUACAGAGGUCGCUUAAGA650.950169
NC_002549.1VP24CCAACACUAACCAUUUCAAUUGAAAUGGUUAGUGUUGG3860.949594
NC_002549.1VP24GGAACUCAAAAUCAUACAAUUGUAUGAUUUUGAGUUCC5440.949423
NC_002549.1VP24GGAACAAUUGAGCCUAAAAUUUUAGGCUCAAUUGUUCC4260.947341
NC_002549.1VP24UAUUGAAAUUGGAACUCAAUUGAGUUCCAAUUUCAAUA5340.945447
NC_002549.1VP24GCGACCUCUGUAACUUCUUAAGAAGUUACAGAGGUCGC710.945417
NC_002549.1VP24CCCUAUUGCAUAGACUGAAUUCAGUCUAUGCAAUAGGG1640.943643