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Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.
Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.
Result
StrainGenemRNAsiRNAPositionEfficacy
NC_014372.1VP24GAAGACACUUGCUAAAAAAUUUUUUAGCAAGUGUCUUC6811.160880
NC_014372.1VP24CACUAAUCUUAGAAUUCAAUUGAAUUCUAAGAUUAGUG7191.154379
NC_014372.1VP24GGAGCAACUAAGUCUAAAAUUUUAGACUUAGUUGCUCC4261.101697
NC_014372.1VP24CCUUGAAGACACUUGCUAAUUAGCAAGUGUCUUCAAGG6771.082188
NC_014372.1VP24AGAUCAGCUAAUUGAUCAAUUGAUCAAUUAGCUGAUCU3091.063488
NC_014372.1VP24GAUGCAAGCACUAAUCUUAUAAGAUUAGUGCUUGCAUC7111.061851
NC_014372.1VP24GUGCGAUCAAACAUCCUAAUUAGGAUGUUUGAUCGCAC4571.057932
NC_014372.1VP24CCUAAAGUUCAUCAACCAAUUGGUUGAUGAACUUUAGG4711.050843
NC_014372.1VP24GCACUAAUCUUAGAAUUCAUGAAUUCUAAGAUUAGUGC7181.050181
NC_014372.1VP24GCAAGAGCCUGACAAAUCAUGAUUUGUCAGGCUCUUGC6031.048568
NC_014372.1VP24CACUACAUGUUGUGAAUUAUAAUUCACAACAUGUAGUG4971.044020
NC_014372.1VP24GAGCAACUAAGUCUAAAAAUUUUUAGACUUAGUUGCUC4271.041391
NC_014372.1VP24GGUGCGAUCAAACAUCCUAUAGGAUGUUUGAUCGCACC4561.029674
NC_014372.1VP24AGUUCAUCAACCAACUAGAUCUAGUUGGUUGAUGAACU4761.029526
NC_014372.1VP24CAGGCUAAGGAGCAACUAAUUAGUUGCUCCUUAGCCUG4181.029015
NC_014372.1VP24AAGGAGCAACUAAGUCUAAUUAGACUUAGUUGCUCCUU4241.021442
NC_014372.1VP24GGAACAAACCACUUUCAAAUUUGAAAGUGGUUUGUUCC3881.000857
NC_014372.1VP24GUUGCAAGAGCCUGACAAAUUUGUCAGGCUCUUGCAAC6000.994364
NC_014372.1VP24GCUCCAGCCUGGUCAAUGAUCAUUGACCAGGCUGGAGC1960.990547
NC_014372.1VP24CGCUAGGCUUAAUUGCUGAUCAGCAAUUAAGCCUAGCG3530.988351
NC_014372.1VP24CCUUAUUGCACAGGCUCAAUUGAGCCUGUGCAAUAAGG1640.988190
NC_014372.1VP24AGGAGCAACUAAGUCUAAAUUUAGACUUAGUUGCUCCU4250.978483
NC_014372.1VP24UGCACUACAUGUUGUGAAUAUUCACAACAUGUAGUGCA4950.974954
NC_014372.1VP24GAUGCACUACAUGUUGUGAUCACAACAUGUAGUGCAUC4930.974569
NC_014372.1VP24UAAGGAGCAACUAAGUCUAUAGACUUAGUUGCUCCUUA4230.974046
NC_014372.1VP24GGCACUGCGGGUCAUACUAUAGUAUGACCCGCAGUGCC2760.972723
NC_014372.1VP24CUUGAAGACACUUGCUAAAUUUAGCAAGUGUCUUCAAG6780.970890
NC_014372.1VP24GCAGGAGCGCUAGGCUUAAUUAAGCCUAGCGCUCCUGC3460.967271
NC_014372.1VP24CUACAUGUUGUGAAUUACAUGUAAUUCACAACAUGUAG4990.965940
NC_014372.1VP24CAAACAUCCUAAAGUUCAUAUGAACUUUAGGAUGUUUG4640.963472
NC_014372.1VP24CCUGGUCAAUGACCAGGAAUUCCUGGUCAUUGACCAGG2030.962493
NC_014372.1VP24UGAAGACACUUGCUAAAAAUUUUUAGCAAGUGUCUUCA6800.961639
NC_014372.1VP24AGAUGCAAGCACUAAUCUUAAGAUUAGUGCUUGCAUCU7100.961113
NC_014372.1VP24GGGAUUGAAUUUGAUGUUAUAACAUCAAAUUCAAUCCC1300.956745
NC_014372.1VP24GUCAAUGACCAGGAACUUAUAAGUUCCUGGUCAUUGAC2070.952205
NC_014372.1VP24GCUUCUUACUACUGGAACAUGUUCCAGUAGUAAGAAGC3750.949575
NC_014372.1VP24CCCAGAUGCAAGCACUAAUAUUAGUGCUUGCAUCUGGG7070.948150
NC_014372.1VP24CCCUGGUGCGAUCAAACAUAUGUUUGAUCGCACCAGGG4520.946123
NC_014372.1VP24UACAUGUUGUGAAUUACAAUUGUAAUUCACAACAUGUA5000.945679
NC_014372.1VP24CAACUAAGUCUAAAAAUGUACAUUUUUAGACUUAGUUG4300.945101
NC_014372.1VP24GAGUUGCAAGAGCCUGACAUGUCAGGCUCUUGCAACUC5980.944612
NC_014372.1VP24GCUGAUUGGCUUCUUACUAUAGUAAGAAGCCAAUCAGC3670.942722
NC_014372.1VP24GCCUUAUUGCACAGGCUCAUGAGCCUGUGCAAUAAGGC1630.942605
NC_014372.1VP24AGUUGCAAGAGCCUGACAAUUGUCAGGCUCUUGCAACU5990.941624
NC_014372.1VP24ACAUGUUGUGAAUUACAAUAUUGUAAUUCACAACAUGU5010.941005
NC_014372.1VP24UGUUGUGAAUUACAAUGGAUCCAUUGUAAUUCACAACA5040.940577
NC_014372.1VP24GAUCAGCUAAUUGAUCAAUAUUGAUCAAUUAGCUGAUC3100.940300
NC_014372.1VP24CAAUGACCAGGAACUUAUUAAUAAGUUCCUGGUCAUUG2090.936860
NC_014372.1VP24GCUAGGCUUAAUUGCUGAUAUCAGCAAUUAAGCCUAGC3540.936533
NC_014372.1VP24GAUCAAACAUCCUAAAGUUAACUUUAGGAUGUUUGAUC4610.935034