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Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.
Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.
Result
StrainGenemRNAsiRNAPositionEfficacy
NC_004161.1VP24UGACAAGACUCAAAACAAAUUUGUUUUGAGUCUUGUCA1701.177236
NC_004161.1VP24GCAUGUUGUCAAUUACAAUAUUGUAAUUGACAACAUGC5011.115225
NC_004161.1VP24GACAAGACUCAAAACAAAUAUUUGUUUUGAGUCUUGUC1711.107904
NC_004161.1VP24CUGACAAGACUCAAAACAAUUGUUUUGAGUCUUGUCAG1691.089754
NC_004161.1VP24GCGAUGACAAGAAAUCUUUAAAGAUUUCUUGUCAUCGC2081.082872
NC_004161.1VP24CCCUGCAUGUUGUCAAUUAUAAUUGACAACAUGCAGGG4971.074234
NC_004161.1VP24AGUUCAAGAGCCUGACAAAUUUGUCAGGCUCUUGAACU6001.047660
NC_004161.1VP24CUUCUGACAAGACUCAAAAUUUUGAGUCUUGUCAGAAG1661.046664
NC_004161.1VP24GGCGAUGACAAGAAAUCUUAAGAUUUCUUGUCAUCGCC2071.044219
NC_004161.1VP24CAUUAAUAAUGGAGUUCAAUUGAACUCCAUUAUUAAUG7191.042962
NC_004161.1VP24GCUCCUAACUACAACGUCAUGACGUUGUAGUUAGGAGC3751.040682
NC_004161.1VP24GAGUUUGAUGUAAGUCAAAUUUGACUUACAUCAAACUC1361.032628
NC_004161.1VP24CGAUGACAAGAAAUCUUUUAAAAGAUUUCUUGUCAUCG2091.030610
NC_004161.1VP24GAUUGGCUCCUAACUACAAUUGUAGUUAGGAGCCAAUC3701.030037
NC_004161.1VP24GGAUGCAAUCAUUAAUAAUAUUAUUAAUGAUUGCAUCC7101.022632
NC_004161.1VP24GGGACUUCUACACACACAAUUGUGUGUGUAGAAGUCCC5441.019616
NC_004161.1VP24GCUUAGUCUUCGUAUGUUAUAACAUACGAAGACUAAGC4321.018341
NC_004161.1VP24UGCAUGUUGUCAAUUACAAUUGUAAUUGACAACAUGCA5001.015459
NC_004161.1VP24GGACUUCUACACACACAAUAUUGUGUGUGUAGAAGUCC5451.005363
NC_004161.1VP24GAUGUAAGUCAAAAAGGCAUGCCUUUUUGACUUACAUC1421.001073
NC_004161.1VP24CCUGGGCGAUGACAAGAAAUUUCUUGUCAUCGCCCAGG2030.999378
NC_004161.1VP24CGCCCUGCAUGUUGUCAAUAUUGACAACAUGCAGGGCG4950.998978
NC_004161.1VP24GGGAUGCAAUCAUUAAUAAUUAUUAAUGAUUGCAUCCC7090.997939
NC_004161.1VP24CAUCUGUUCCAGAACCCAAUUGGGUUCUGGAACAGAUG2320.994915
NC_004161.1VP24CCUGCAUGUUGUCAAUUACGUAAUUGACAACAUGCAGG4980.994051
NC_004161.1VP24AAUCAGCUAUGAAUUCUAAUUAGAAUUCAUAGCUGAUU6170.991292
NC_004161.1VP24CUCUUCUGACAAGACUCAAUUGAGUCUUGUCAGAAGAG1640.989185
NC_004161.1VP24GGCUCUCGGUCUAAUUUCUAGAAAUUAGACCGAGAGCC3510.988415
NC_004161.1VP24UGGUUUACUCAGUAGUAUUAAUACUACUGAGUAAACCA5190.987453
NC_004161.1VP24CUCCUAACUACAACGUCAAUUGACGUUGUAGUUAGGAG3760.986671
NC_004161.1VP24CAACGUCAACACAUUUCAAUUGAAAUGUGUUGACGUUG3860.979265
NC_004161.1VP24CUGCAUGUUGUCAAUUACAUGUAAUUGACAACAUGCAG4990.978755
NC_004161.1VP24CAGUCAAGUUCUCAUUACUAGUAAUGAGAACUUGACUG6470.976339
NC_004161.1VP24UCUUCUGACAAGACUCAAAUUUGAGUCUUGUCAGAAGA1650.974883
NC_004161.1VP24CUGACAAAUCAGCUAUGAAUUCAUAGCUGAUUUGUCAG6110.969484
NC_004161.1VP24UGAGUUUGAUGUAAGUCAAUUGACUUACAUCAAACUCA1350.969248
NC_004161.1VP24GAGCCUGACAAAUCAGCUAUAGCUGAUUUGUCAGGCUC6070.965779
NC_004161.1VP24GUUUGAUGUAAGUCAAAAAUUUUUGACUUACAUCAAAC1380.961871
NC_004161.1VP24GGACCAGUCAAGUUCUCAUAUGAGAACUUGACUGGUCC6430.960796
NC_004161.1VP24CUCUCGGUCUAAUUUCUGAUCAGAAAUUAGACCGAGAG3530.958215
NC_004161.1VP24GCUCUUCUGACAAGACUCAUGAGUCUUGUCAGAAGAGC1630.957342
NC_004161.1VP24GACCAGUCAAGUUCUCAUUAAUGAGAACUUGACUGGUC6440.952549
NC_004161.1VP24GGGCGAUGACAAGAAAUCUAGAUUUCUUGUCAUCGCCC2060.951528
NC_004161.1VP24UCAAGUUCUCAUUACUUCAUGAAGUAAUGAGAACUUGA6500.949395
NC_004161.1VP24AGUUUGAUGUAAGUCAAAAUUUUGACUUACAUCAAACU1370.949224
NC_004161.1VP24AAAUCAGCUAUGAAUUCUAUAGAAUUCAUAGCUGAUUU6160.947090
NC_004161.1VP24CGGGACUUCUACACACACAUGUGUGUGUAGAAGUCCCG5430.943756
NC_004161.1VP24AGUCAAGUUCUCAUUACUUAAGUAAUGAGAACUUGACU6480.937588
NC_004161.1VP24GAAGUUCAAGAGCCUGACAUGUCAGGCUCUUGAACUUC5980.936014
NC_004161.1VP24UCAAGAGCCUGACAAAUCAUGAUUUGUCAGGCUCUUGA6030.935375