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Ebola Virus Computational Resources (EbolaVCR) is the in silico resources developed to facilitate scientific community fighting against deadly virus EBOLA. This server enlists possible vaccine candidates, therapeutic siRNAs and other related resources.
Reference: Dhanda et. al. (2016) A web-based resource for designing therapeutics against Ebola Virus. Sci Rep. 6:24782.
Result
StrainGenemRNAsiRNAPositionEfficacy
NC_004161.1NPCAGGACUCCUAAUUGUCAAUUGACAAUUAGGAGUCCUG7251.116798
NC_004161.1NPGGACUAAUUUCUUGAUUAAUUAAUCAAGAAAUUAGUCC6141.115040
NC_004161.1NPCGCUUUUCAGGACUCCUAAUUAGGAGUCCUGAAAAGCG7181.103505
NC_004161.1NPGGACGAUCAGGAAAGAAGAUCUUCUUUCCUGAUCGUCC11041.087596
NC_004161.1NPGAGCGACUGGCUAAAUUAAUUAAUUUAGCCAGUCGCUC11981.073793
NC_004161.1NPAGGACUCCUAAUUGUCAAAUUUGACAAUUAGGAGUCCU7261.071312
NC_004161.1NPCCUGAUAUCGGUCAAUCAAUUGAUUGACCGAUAUCAGG19091.067153
NC_004161.1NPGAAAGAACGACUGGACAAAUUUGUCCAGUCGUUCUUUC21061.064627
NC_004161.1NPCAAUCAAAGUCUAUGCAAAUUUGCAUAGACUUUGAUUG19211.062286
NC_004161.1NPCGAUCAGGAAAGAAGAAUAUAUUCUUCUUUCCUGAUCG11071.062094
NC_004161.1NPCAACAAGGACGACAAUCGAUCGAUUGUCGUCCUUGUUG15691.061853
NC_004161.1NPGCAACAACAAGGACGACAAUUGUCGUCCUUGUUGUUGC15651.061398
NC_004161.1NPGAUGAUGACGAUGCAUCAAUUGAUGCAUCGUCAUCAUC17621.051719
NC_004161.1NPCGAGUUUGUUUCUUCCCAAUUGGGAAGAAACAAACUCG4611.046775
NC_004161.1NPCAACAACAAGGACGACAAUAUUGUCGUCCUUGUUGUUG15661.038375
NC_004161.1NPGCUGCAACGAGUGGAAAAAUUUUUCCACUCGUUGCAGC3671.036186
NC_004161.1NPGAGACACCAUCAUUCCUAAUUAGGAAUGAUGGUGUCUC13491.033400
NC_004161.1NPGAGGAUGACAAUAAAGCUUAAGCUUUAUUGUCAUCCUC14741.032901
NC_004161.1NPGAGCAAUGCUGUACAGUAUAUACUGUACAGCAUUGCUC2761.031239
NC_004161.1NPGAACGACUGGACAAAGAGAUCUCUUUGUCCAGUCGUUC21101.029687
NC_004161.1NPCGAUCAUGAGGAUGACAAUAUUGUCAUCCUCAUGAUCG14671.029305
NC_004161.1NPGCUGAAACAUCACAAUUGAUCAAUUGUGAUGUUUCAGC18821.026892
NC_004161.1NPGAAAAAGUCCAGCGACAAAUUUGUCGCUGGACUUUUUC5081.022516
NC_004161.1NPAGGACUAAUUUCUUGAUUAUAAUCAAGAAAUUAGUCCU6131.019850
NC_004161.1NPAGACCCUGAUAUCGGUCAAUUGACCGAUAUCAGGGUCU19051.019268
NC_004161.1NPCAAAGUCUAUGCAAAAAUUAAUUUUUGCAUAGACUUUG19251.018123
NC_004161.1NPCGGAAUUGAUUUCCAAGAAUUCUUGGAAAUCAAUUCCG1861.016211
NC_004161.1NPUCAUGAGGAUGACAAUAAAUUUAUUGUCAUCCUCAUGA14701.014375
NC_004161.1NPCCCUGAUAUCGGUCAAUCAUGAUUGACCGAUAUCAGGG19081.013019
NC_004161.1NPAGAGCAAUGCUGUACAGUAUACUGUACAGCAUUGCUCU2751.010238
NC_004161.1NPAGAGCGACUGGCUAAAUUAUAAUUUAGCCAGUCGCUCU11971.009085
NC_004161.1NPGAAUUGAUUUCCAAGAAAAUUUUCUUGGAAAUCAAUUC1881.008943
NC_004161.1NPAAUUGUUCUUGGAGAGCAAUUGCUCUCCAAGAACAAUU2631.008533
NC_004161.1NPGGAAUUGAUUUCCAAGAAAUUUCUUGGAAAUCAAUUCC1871.007012
NC_004161.1NPUGGUCUCUACCCACAGUUAUAACUGUGGGUAGAGACCA9301.006549
NC_004161.1NPCAAUUUCUCUCAUUUGCGAUCGCAAAUGAGAGAAAUUG4451.004090
NC_004161.1NPCCAUCUGCUGAGAACUCAAUUGAGUUCUCAGCAGAUGG19591.002412
NC_004161.1NPGACUAAUUUCUUGAUUAAAUUUAAUCAAGAAAUUAGUC6151.000664
NC_004161.1NPCAUGAGUCCCAGAGACAAAUUUGUCUCUGGGACUCAUG21720.999642
NC_004161.1NPGGAUCAAGGUGAUGAUGAUAUCAUCAUCACCUUGAUCC17160.998355
NC_004161.1NPAGAAAGAACGACUGGACAAUUGUCCAGUCGUUCUUUCU21050.997873
NC_004161.1NPAGGUGAUGAUGAUCCCUCAUGAGGGAUCAUCAUCACCU17220.996797
NC_004161.1NPGAGUUAACAACCUAGAACAUGUUCUAGGUUGUUAACUC9110.994957
NC_004161.1NPUGCUGUCAUUGCUAAUUCAUGAAUUAGCAAUGACAGCA6870.994655
NC_004161.1NPCAGGAAAGAAGAAUACUAAUUAGUAUUCUUCUUUCCUG11110.994170
NC_004161.1NPGUUCGAUCUUGACGAUCAUAUGAUCGUCAAGAUCGAAC14550.992448
NC_004161.1NPAAGAACGACUGGACAAAGAUCUUUGUCCAGUCGUUCUU21080.990860
NC_004161.1NPGGUAAUAUUUAGCACUGAUAUCAGUGCUAAAUAUUACC20250.989915
NC_004161.1NPGGUGAUGAUGAUCCCUCAAUUGAGGGAUCAUCAUCACC17230.989873
NC_004161.1NPGAGUUUGUUUCUUCCCAAAUUUGGGAAGAAACAAACUC4620.988896