Cosenserved Peptide Immune Response
The conserved peptides are the 9mers that were found among all the five strains of Ebola virus. In this we have tabulated the number of 9mers and their immune response predicted using different algorithms.
| 9mer seqeunce | CTL | Propred1 | propred_count | Nhlapred | nhla_count | Propred | count | BCE |
|---|---|---|---|---|---|---|---|---|
| AALWQQWDR | N | HLA-A20 Cattle , HLA-A*3101 , HLA-A*3302 , HLA-A68.1 | 4 | NA | 0 | NA | 0 | N |
| ALWQQWDRQ | N | NA | 0 | NA | 0 | NA | 0 | Y |
| EAALWQQWD | N | NA | 0 | NA | 0 | NA | 0 | N |
| EVYQRLHSD | N | NA | 0 | NA | 0 | NA | 0 | Y |
| FEAALWQQW | N | HLA-B*2702 , HLA-B40 , HLA-B*4403 , HLA-B*51 , HLA-B*5301 , HLA-B*5401 , HLA-B*5801 , HLA-B61 , MHC-Kk | 9 | NA | 0 | NA | 0 | N |
| LEVYQRLHS | N | HLA-B40 , HLA-B*4403 , HLA-B61 , MHC-Kk | 4 | NA | 0 | DRB1,0801 , DRB1,0802 , DRB1,0804 , DRB1,0806 , DRB1,0813 , DRB1,0817 , DRB1,1101 , DRB1,1102 , DRB1,1104 , DRB1,1106 , DRB1,1114 , DRB1,1120 , DRB1,1121 , DRB1,1128 , DRB1,1301 , DRB1,1302 , DRB1,1304 , DRB1,1305 , DRB1,1311 , DRB1,1322 , DRB1,1323 , DRB1,1327 , DRB1,1328 , DRB1,1501 , DRB1,1502 , DRB1,1506 | 26 | N |
| LWQQWDRQS | N | NA | 0 | NA | 0 | NA | 0 | N |
| QRLHSDKGG | N | NA | 0 | NA | 0 | NA | 0 | N |
| VLEVYQRLH | N | HLA-A1 , HLA-A2.1 | 2 | NA | 0 | NA | 0 | N |
| VYQRLHSDK | N | HLA-A*1101 | 1 | NA | 0 | DRB1,0813 | 1 | N |
| WQQWDRQSL | N | HLA-A*0201 , HLA-A*0205 , HLA-A24 , HLA-B14 , HLA-B*2702 , HLA-B*2705 , HLA-B*3902 , HLA-B*51 , HLA-B*5301 , HLA-B*5401 , HLA-B62 , HLA-B7 , MHC-Db revised | 13 | NA | 0 | DRB1,1114 , DRB1,1120 , DRB1,1302 , DRB1,1323 | 4 | N |
| YQRLHSDKG | N | HLA-B*5401 | 1 | NA | 0 | DRB1,0401 , DRB1,0405 , DRB1,0408 , DRB1,0421 , DRB1,0426 | 5 | Y |
| 9mer seqeunce | CTL | Propred1 | propred_count | Nhlapred | nhla_count | Propred | count | BCE |