Type/paste query sequence in FASTA format (Please submit one sequence at a time. The program will ignore all non-standard characters)
or Upload your sequence
Select Database Hormone Recpetor Both BLAST E-value Show alignment of top 10 25 50 100 matches Advance parameters Weight matrix BLOSUM80BLOSUM62BLOSUM50BLOSUM45BLOSUM90PAM250PAM70PAM30 Word size Gap cost Opening: 9 Extension: 2Opening : 8 Extension: 2Opening : 7 Extension: 2Opening : 12 Extension: 1Opening : 11 Extension: 1Opening : 10 Extension: 1
Similarity search is the most widely used method of functional annotation. If a protein of unknown function shows similarity with a experimentally annotated protein, then unknonw protein can be predicted to have same function. Keeping this in view, BLAST search was provided to predict protein that can be a hormone. User can do BLAST search of their protein against HMRbase. The server provide option to modify different parameters like scoring matrices, gap penalty, word size etc.
A database of hormones and their receptors