Description of Datasets in CancerLivER
This page shows brief information about datasets selected by user. For more information see HELP page.
The total number of entries retrieved from this search are 111Please click on Biomarker_ID to view detailed information.
| CancerLivER ID | Profiling Technique | GEO Series ID | Values | Packge | Platform | No# Samples | Cancer Type | No of Genes | Pubmed ID | Download |
|---|---|---|---|---|---|---|---|---|---|---|
| 1052 | Illumina Array | GSE89377 | Raw value with background correction | Limma | GPL6947 Illumina HumanHT-12 V3.0 expression beadchip | 107 | Hepatocellular carcinoma | 25159 | NA |  |
| 1053 | Agilent-1-color Array | GSE26321 | A-values with bakground correction | Limma | GPL4133 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F | 6 | Hepatocellular carcinoma | 30232 | NA | |
| 1054 | Agilent-1-color Array | GSE32221 | A-values with bakground correction | Limma | GPL4133: Agilent-014850 Whole Human Genome Microarray 4x44K G4112F | 48 | Hepatocellular carcinoma | 31072 | NA | |
| 1055 | Agilent-1-color Array | GSE46408 | A-values with bakground correction | Limma | GPL4133 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F | 12 | Hepatocellular carcinoma | 30589 | NA | |
| 1056 | Agilent-1-color Array | GSE54236 | A-values with bakground correction | Limma | GPL6480 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F | 161 | Hepatocellular carcinoma | 31072 | 25666192 | |
| 1057 | Agilent-1-color Array | GSE55191 | A-values with bakground correction | Limma | GPL15314: Arraystar Human LncRNA microarray V2.0 (Agilent_033010 Probe Name version) | 6 | Hepatocellular carcinoma | NA | 26054679 | |
| 1058 | Agilent-1-color Array | GSE57555 | A-values with bakground correction | Limma | GPL16699 :Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version) ; GPL18044:Agilent-046064 Unrestricted_Human_miRNA_V19.0_Microarray (Feature Number version) | 64 | Hepatocellular carcinoma and Cholangiocarcinoma | 36477 | 26538415 | |
| 1059 | Agilent-1-color Array | GSE67318 | A-values with bakground correction | Limma | GPL17077 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray | 8 | Hepatocellular carcinoma | 36477 | NA | |
| 1060 | Agilent-1-color Array | GSE67764 | A-values with bakground correction | Limma | GPL17077: Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray | 9 | Hepatocellular carcinoma | 36477 | 26077142 | |
| 1061 | Agilent-1-color Array | GSE70880 | A-values with bakground correction | Limma | GPL19748 Agilent-038314 CBC Homo sapiens lncRNA + mRNA microarray V2.0 | 32 | Hepatocellular carcinoma | 71584 | 26812883 27578251 | |
| 1062 | Agilent-1-color Array | GSE95698 | A-values with bakground correction | Limma | GPL17077 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 | 9 | Hepatocellular carcinoma | 36477 | 29445190 | |
| 1063 | Agilent-2-color Array | GSE17856 | A-values with bakground correction | Limma | GPL6480 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F | 95 | Hepatocellular carcinoma | 31072 | 20380719 | |
| 1064 | Agilent-2-color Array | GSE34674 | A-values with bakground correction | Limma | GPL6480: Agilent-014850 Whole Human Genome Microarray 4x44K G4112F | 4 | Hepatocellular carcinoma | 31072 | 21316602 24360797 | |
| 1065 | Agilent-2-color Array | GSE62043 | A-values with bakground correction | Limma | GPL6480:Agilent-014850 Whole Human Genome Microarray 4x44K G4112F | 100 | Hepatocellular carcinoma | 30574 | 26817861 | |
| 1066 | Agilent-2-color Array | GSE65484 | A-values with bakground correction | Limma | GPL4091 Agilent-014693 Human Genome CGH Microarray 244A | 64 | Hepatocellular carcinoma | 103916 | 25901726 | |
| 1067 | Agilent-2-color Array | GSE94508 | A-values with bakground correction | Limma | GPL19978 Agilent-069978 Arraystar Human CircRNA microarray V1 | 10 | Hepatocellular carcinoma | 6327 | NA | |
| 1068 | Other array | GSE10140 | A-values with bakground correction | Limma | GPL5474 Human 6k Transcriptionally Informative Gene Panel for DASL | 82 | Hepatocellular carcinoma | 6144 | 21320499 18923165 | |
| 1069 | Other array | GSE10141 | A-values with bakground correction | Limma | GPL5474 Human 6k Transcriptionally Informative Gene Panel for DASL | 80 | Hepatocellular carcinoma | 6144 | 18923165 | |
| 1070 | Other array | GSE54238 | A-values with bakground correction | Limma | GPL16955 :Arraystar human lncRNA microarray V1-100309 | 56 | Hepatocellular carcinoma | 13084 | 25964079 27449498 | |
| 1071 | Other array | GSE70297 | A-values with bakground correction | Limma | GPL19589 NanoString Prognostic Liver Signature panel - Slim | 263 | Hepatocellular carcinoma | 36 | 27960085 | |
| 1072 | High-throughput | GSE100207 | FPKM | NA | GPL11154Illumina HiSeq 2000 (Homo sapiens) | 21 | Hepatocellular carcinoma | 49953 | 30053265 | |
| 1073 | High-throughput | GSE104310 | FPKM | NA | GPL16791 Illumina HiSeq 2500 (Homo sapiens) | 20 | Hepatocellular carcinoma | 25263 | NA | |
| 1074 | High-throughput | GSE33294 | FPKM | NA | GPL10999 Illumina Genome Analyzer IIx (Homo sapiens) | 6 | Hepatocellular carcinoma | 147951 | 23766440 | |
| 1075 | High-throughput | GSE55048 | FPKM | NA | GPL9115Illumina Genome Analyzer II (Homo sapiens) | 8 | Hepatocellular carcinoma | 23143 | 24798046 | |
| 1076 | High-throughput | GSE55758 | RPKM | NA | GPL9052 Illumina Genome Analyzer (Homo sapiens) | 16 | Hepatocellular carcinoma | 18103 | 26300991 | |
| 1077 | High-throughput | GSE56545 | normalized_read_count | NA | GPL15433Illumina HiSeq 1000 (Homo sapiens) | 42 | Hepatocellular carcinoma | 51060 | NA | |
| 1078 | High-throughput | GSE63863 | FPKM | NA | GPL11154 Illumina HiSeq 2000 (Homo sapiens) | 24 | Hepatocellular carcinoma | 23284 | 25683523 | |
| 1079 | High-throughput | GSE65485 | FPKM | NA | GPL11154 Illumina HiSeq 2000 (Homo sapiens) | 55 | Hepatocellular carcinoma | 22351 | 25901726 | |
| 1080 | High-throughput | GSE69164 | FPKM | NA | GPL11154 Illumina HiSeq 2000 (Homo sapiens) | 33 | Hepatocellular carcinoma | 23284 | 26271415 | |
| 1081 | High-throughput | GSE70089 | Raw Read counts | NA | GPL11154 Illumina HiSeq 2000 (Homo sapiens) | 12 | Hepatocellular carcinoma | 57820 | 27737935 | |
| 1082 | High-throughput | GSE77314 | Normalized | NA | GPL9052Illumina Genome Analyzer (Homo sapiens) | 100 | Hepatocellular carcinoma | 30926 | 27119355 | |
| 1083 | High-throughput | GSE77509 | normalized_read_count | NA | GPL16791 Illumina HiSeq 2500 (Homo sapiens) | 60 | Hepatocellular carcinoma | 22827 | 28194035 | |
| 1084 | High-throughput | GSE82177 | Counts | NA | GPL11154 Illumina HiSeq 2000 (Homo sapiens) | 27 | Hepatocellular carcinoma | 41536 | 27721404 | |
| 1085 | High-throughput | GSE94660 | RPKM | NA | GPL16791 Illumina HiSeq 2500 (Homo sapiens) | 42 | Hepatocellular carcinoma | 26760 | 29212479 | |
| 1086 | High-throughput | GSE97214 | FPKM | NA | GPL16791 Illumina HiSeq 2500 (Homo sapiens) | 18 | Hepatocellular carcinoma | 25264 | 28489570 | |
| 1087 | High-throughput | TCGA | FPKM | NA | HT-seq (RNA-seq) | 424 | Hepatocellular carcinoma | 19834 | 28622513 | |
| 1088 | Affymetrix Array | GSE115016 | RMA (Robust Multi Array) | oligo and affy | GPL21572 [miRNA-4] Affymetrix Multispecies miRNA-4 Array | 24 | Hepatocellular carcinoma | 25065 | 30364632 | |
| 1089 | Affymetrix Array | GSE20594 | RMA (Robust Multi Array) | oligo and affy | GPL10122 [Homo sapiens microRNA profiling platform version 4] | 89 | Hepatocellular carcinoma | 358 | 21324318 | |
| 1090 | Affymetrix Array | GSE22058 | RMA (Robust Multi Array) | oligo and affy | GPL6793 Rosetta/Merck Human RSTA Custom Affymetrix 1.0 microarray; GPL10457 Rosetta human miRNA qPCR array; GPL9733 | 389 | Hepatocellular carcinoma | 37585 | 20739924 22403344 | |
| 1091 | Affymetrix Array | GSE30297 | RMA (Robust Multi Array) | oligo and affy | GPL8786[miRNA-1] Affymetrix Multispecies miRNA-1 Array | 97 | Hepatocellular carcinoma | 7815 | 22008552 | |
| 1092 | Affymetrix Array | GSE40744 | RMA (Robust Multi Array) | oligo and affy | GPL14613 :[miRNA-2] Affymetrix Multispecies miRNA-2 Array | 76 | Hepatocellular carcinoma | 20706 | 23390000 | |
| 1093 | Affymetrix Array | GSE54238 | RMA (Robust Multi Array) | oligo and affy | GPL16955 :Arraystar human lncRNA microarray V1-100309 | 56 | Hepatocellular carcinoma | 17890 | 25964079 27449498 | |
| 1095 | Affymetrix Array | GSE64989 | RMA (Robust Multi Array) | oligo and affy | GPL16384 [miRNA-3] Affymetrix Multispecies miRNA-3 Array | 18 | Hepatocellular carcinoma | 25015 | 26697811 | |
| 1096 | Illumina Array | GSE36915 | Raw value with background correction | Limma | GPL8179Illumina Human v2 MicroRNA expression beadchip | 89 | Hepatocellular carcinoma | 1145 | 22613005 | |
| 1097 | Illumina Array | GSE38226 | Raw value with background correction | Limma | GPL6947 Illumina HumanHT-12 V3.0 expression beadchip GPL8179 Illumina Human v2 MicroRNA expression beadchip | 44 | Hepatocellular carcinoma | 1145 | NA | |
| 1098 | Agilent Array | GSE112613 | A-values with bakground correction | Limma | GPL21827 Agilent-079487 Arraystar Human LncRNA microarray V4 | 10 | Hepatocellular carcinoma | NA | NA | |
| 1099 | Agilent Array | GSE115018 | A-values with bakground correction | Limma | GPL20115 Agilent-067406 Human CBC lncRNA + mRNA microarray V4.0 | 24 | Hepatocellular carcinoma | 22595 | 30364632 | |
| 1100 | Agilent Array | GSE14985 | A-values with bakground correction | Limma | GPL8227 Agilent-019118 Human miRNA Microarray 2.0 G4470B | 4 | Hepatocellular carcinoma | 821 | 19946373 | |
| 1101 | Agilent Array | GSE41874 | A-values with bakground correction | Limma | GPL7722 miRCURY LNA microRNA Array, v.10.0 - hsa, mmu & rno | 10 | Hepatocellular carcinoma | 5549 | NA | |
| 1102 | Agilent Array | GSE57555 | A-values with bakground correction | Limma | GPL16699 :Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version) ; GPL18044:Agilent-046064 Unrestricted_Human_miRNA_V19.0_Microarray (Feature Number version) | 64 | Hepatocellular carcinoma and Cholangiocarcinoma | 2025 | 26538415 | |