CancerLivER:Analysis of Multiple Genes

Analysis of Multiple Genes

This module allows the User to analyze the expression pattern for a set of Genes in selected dataset/profiling technique. User needs to submit the list of genes in csv format. Further the user can also perform ssGSEA (single sample Gene set Enrichment Analysis) analysis for GO terms include GO-BP (GO Biological Processes), GO-MF (GO Molecular Functions), GO-CC (GO Cellular Components), and KEGG pathways. For more information see HELP page. Here, user can also get more information like Entrez ID, Gene Name, Ensembl ID, etc. regarding selected Gene with Gene Info option.

Paste list of Genes (Gene_symbols) separated by commas:
OR Submit Gene symbols file: 
Select Dataset/Profiling Technique:
Affymetrix       Illumina      Agilent-1-color      Agilent-2-color      TCGA Cohort     

Compute and Display Results:
Mean Expression (Plots)       Mean Expression (Tabular)      Sample-Wise      ssGSEA GO-BP       ssGSEA GO-MF      ssGSEA GO-CC      ssGSEA KEGG Pathways      Gene info     

         

         Raghava's group    CancerCSP    CancerSPP    CancerPDF    CancerTSP    CancerLSP    HCCPred   

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