Description of Datasets in CancerLivER
This page shows brief information about datasets selected by user. For more information see HELP page.
The total number of entries retrieved from this search are 25Please click on Biomarker_ID to view detailed information.
| CancerLivER ID | Profiling Technique | GEO Series ID | Values | Packge | Platform | No# Samples | Cancer Type | No of Genes | Pubmed ID | Download |
|---|---|---|---|---|---|---|---|---|---|---|
| 1088 | Affymetrix Array | GSE115016 | RMA (Robust Multi Array) | oligo and affy | GPL21572 [miRNA-4] Affymetrix Multispecies miRNA-4 Array | 24 | Hepatocellular carcinoma | 25065 | 30364632 |  |
| 1089 | Affymetrix Array | GSE20594 | RMA (Robust Multi Array) | oligo and affy | GPL10122 [Homo sapiens microRNA profiling platform version 4] | 89 | Hepatocellular carcinoma | 358 | 21324318 | |
| 1090 | Affymetrix Array | GSE22058 | RMA (Robust Multi Array) | oligo and affy | GPL6793 Rosetta/Merck Human RSTA Custom Affymetrix 1.0 microarray; GPL10457 Rosetta human miRNA qPCR array; GPL9733 | 389 | Hepatocellular carcinoma | 37585 | 20739924 22403344 | |
| 1091 | Affymetrix Array | GSE30297 | RMA (Robust Multi Array) | oligo and affy | GPL8786[miRNA-1] Affymetrix Multispecies miRNA-1 Array | 97 | Hepatocellular carcinoma | 7815 | 22008552 | |
| 1092 | Affymetrix Array | GSE40744 | RMA (Robust Multi Array) | oligo and affy | GPL14613 :[miRNA-2] Affymetrix Multispecies miRNA-2 Array | 76 | Hepatocellular carcinoma | 20706 | 23390000 | |
| 1094 | Affymetrix Array | GSE62011 | RMA (Robust Multi Array) | oligo and affy | GPL16384 [miRNA-3] Affymetrix Multispecies miRNA-3 Array | 6 | Hepatoblastoma | 25015 | 26613016 | |
| 1095 | Affymetrix Array | GSE64989 | RMA (Robust Multi Array) | oligo and affy | GPL16384 [miRNA-3] Affymetrix Multispecies miRNA-3 Array | 18 | Hepatocellular carcinoma | 25015 | 26697811 | |
| 1096 | Illumina Array | GSE36915 | Raw value with background correction | Limma | GPL8179Illumina Human v2 MicroRNA expression beadchip | 89 | Hepatocellular carcinoma | 1145 | 22613005 | |
| 1097 | Illumina Array | GSE38226 | Raw value with background correction | Limma | GPL6947 Illumina HumanHT-12 V3.0 expression beadchip GPL8179 Illumina Human v2 MicroRNA expression beadchip | 44 | Hepatocellular carcinoma | 1145 | NA | |
| 1098 | Agilent Array | GSE112613 | A-values with bakground correction | Limma | GPL21827 Agilent-079487 Arraystar Human LncRNA microarray V4 | 10 | Hepatocellular carcinoma | NA | NA | |
| 1100 | Agilent Array | GSE14985 | A-values with bakground correction | Limma | GPL8227 Agilent-019118 Human miRNA Microarray 2.0 G4470B | 4 | Hepatocellular carcinoma | 821 | 19946373 | |
| 1101 | Agilent Array | GSE41874 | A-values with bakground correction | Limma | GPL7722 miRCURY LNA microRNA Array, v.10.0 - hsa, mmu & rno | 10 | Hepatocellular carcinoma | 5549 | NA | |
| 1102 | Agilent Array | GSE57555 | A-values with bakground correction | Limma | GPL16699 :Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version) ; GPL18044:Agilent-046064 Unrestricted_Human_miRNA_V19.0_Microarray (Feature Number version) | 64 | Hepatocellular carcinoma and Cholangiocarcinoma | 2025 | 26538415 | |
| 1104 | Agilent Array | GSE67882 | A-values with bakground correction | Limma | GPL10850 Agilent-021827 Human miRNA Microarray (V3) | 12 | Hepatocellular carcinoma | 960 | NA | |
| 1105 | Other array | GSE31383 | A-values with bakground correction | Limma | GPL10122 Homo sapiens microRNA profiling platform version 4 | 19 | Hepatocellular carcinoma | 5396 | 22733778 | |
| 1106 | Other array | GSE39678 | A-values with bakground correction | Limma | GPL15852 Homo sapiens 0.5K microRNA Ca_Hu_MiRNome_v1 | 24 | Hepatocellular carcinoma | 1385 | 23499894 | |
| 1107 | Other array | GSE58043 | A-values with bakground correction | Limma | GPL13825: Arraystar Human LncRNA microarray V2.0 (Agilent-033010 Feature Number version) | 14 | Hepatocellular carcinoma | NA | NA | |
| 1108 | Other array | GSE64632 | A-values with bakground correction | Limma | GPL15314 Arraystar Human LncRNA microarray V2.0 (Agilent_033010 Probe Name version) | 6 | Hepatocellular carcinoma | 2141 | 25686840 | |
| 1109 | Other array | GSE6857 | A-values with bakground correction | Limma | GPL4700 OSU-CCC MicroRNA Microarray Version 2.0 | 482 | Hepatocellular carcinoma | 1553 | 18176954 23376425 | |
| 1110 | Other array | GSE78160 | A-values with bakground correction | Limma | GPL21494: State Key Laboratory Human lncRNA array 2412 | 175 | Hepatocellular carcinoma and Cirrhosis | 2408 | NA | |
| 1111 | High-throughput | GSE62010 | Raw read count | NA | GPL15520 Illumina MiSeq (Homo sapiens) | 6 | Hepatoblastoma | 1741 | 26039282 26613016 | |
| 1112 | High-throughput | GSE62017 | Raw read count | NA | GPL19223 NanoString nCounter Human miRNA Expression Assay v2 | 12 | Hepatoblastoma | 822 | 26613016 26039282 | |
| 1113 | High-throughput | GSE76903 | Normalized read count | NA | GPL16791 Illumina HiSeq 2500 (Homo sapiens) | 60 | Hepatocellular carcinoma | 2578 | 28194035 | |
| 1114 | High-throughput | TCGA | FPKM | NA | HT-seq (RNA-seq) | 424 | Hepatocellular carcinoma | 40669 | 28622513 | |
| 1115 | High-throughput | TCGA | FPKM | NA | HT-seq (miRNA-seq) | 424 | Hepatocellular carcinoma | 1887 | 28622513 | |