This page provides help to the users of AlgPred 2.0 on how to efficiently use the various prediction modules. For each module which is implemented in AlgPred 2.0, here we provide the figures and description on how to use that module.
This module predict allergenic/non-allergenic protein from its primary, i.e., amino acid sequence.
IgE epitope Mapping
This module is designed for mapping experimentally validated IgE epitopes on the query sequence.
Motif Scan Module
This module allows users to scan for the IgE motifs in the query sequence. Two programs, i.e., MEME/MAST and MERCI, were used to derive the motifs from experimentally validated IgE epitopes.
BLAST Search Module
This module will predict the given query sequence as an allergen if it gets any hit from the database and non-allergen if it does not get any hit from the database.