Webservers for Genomics

This page provides the information of webservers developed at raghava group for genomics studies.

Name Description
FTG Locating probable protein coding region in nucleotide sequence using FFT based algorithm
GWBLAST Genome wide similarity search using BLAST
GWFASTA Genome Wise Sequence Similarity Search using FASTA
EgPred Prediction of gene (protein coding regions) in eukaryote genomes that includes introns/exons
SRF Find repeats through an analysis of the power spectrum of a given DNA sequence
GeneBench A suite of datasets and tools for evaluating gene prediction methods
FTGPred A web server for predicting genes in a DNAsequence
PHDcleav Prediction of Human Dicer cleavage sites
PolyApred Prediction of polyadenylation signal (PAS) in human DNA sequence
siRNAPred Predicting actual efficacy of both 41mer and 19mer siRNAs with high accuracy
ECGPred Analysis of expression data and correlation between gene expression and nucleotides composition of genes
desiRM Designing of highly efficient siRNA with minimum mutation approach
MARSpred Discriminating between Mitochondrial and Cytosolic Aminoacyl tRNA Synthetases
Icaars Identification & Classification of Aminoacyl tRNA Synthetases
LGEpred Prediction of correlation between amino acid residue and gene expression level

About Raghava

Professor Gajendra P.S. Raghava, Indraprasta Institute of Information Technology, New Delhi is a strong supporter of open source software and open access, all resources developed at his group are free for scientific use.