Access the PEPstrMOD2 source code, Docker container, supported modification database, and documentation resources for local deployment and large-scale peptide structure prediction.
Download the complete PEPstrMOD2 package or deploy using Docker.
Access the complete PEPstrMOD2 source code including MAP parsing, structure prediction workflows, molecular dynamics refinement pipelines, and utility scripts.
Deploy PEPstrMOD2 using a preconfigured Docker image containing all required software dependencies and runtime components for reproducible execution.
Download the complete list of supported post-translational modifications (PTMs), non-natural residues (NCAAs), terminal modifications (NTs, CTs), and annotation tags available in PEPstrMOD2.
Documentation covering installation, deployment, MAP-format annotations, workflow examples, and usage instructions is available through the following resources.