Nfeature:Pseudo k-tuple Composition

Pseudo k-tuple Nucleotide Composition

This module allow users to compute Pseudo k-tuple Nucleotide composition of nucleotide sequences. User may enter either one sequence in one line or sequences in FASTA format. For more information see HELP page.

Paste Nucleotide sequence(s) in FASTA format:

OR Submit sequence file:

Select portion of Sequence:

This section allow users to select either complete or specific portion of the seqeunce, such as

Whole: Performs operation on complete sequence
Start: This allows to cut the user specified portion from the starting of the sequence
End: This allows to cut the user specified portion from the end of the sequence
Split: This allows users to split the sequence into fragments and performs calculation indepedently
Rest: This allows users to drop the residues from start and end, and performs calculation on the remaining fragment

Whole Start End Split Rest: Start End

Select desired lambda value:

Choose Lambda

This allows users to generate the dipeptides with desired order, such as order 1 means dipeptides made of consecutive residues in the provided seqeunce i.e. no gap. Provide Weight

Provide the value of Weight (0-1) by default (0.05)