Welcome To The Scan Module of HLA-DR4Pred 2.0

This module has been developed to scan the proteins to find the binders for MHC-class II allele HLA-DRB1*04:01, using dipeptide composition and BLAST-search. With the help of this module, user can identify regions in a protein, which could be the potential binders of HLA-DRB1*04:01 allele. The other way round, here users can also search a protein sequence to find out novel peptides with binding ability to HLA-DRB1*04:01. It will generate the fragments of length selected by the users and predict their activity. Users can choose either one or more than one alleles by checking the provided boxes. The prediction would be made as per the selected alleles. For more information please visit Help.

Type or paste peptide sequence(s) in FASTA format:

OR   Submit sequence file:

Select Prediction Method:       DPC based   Hybrid (DPC + BLAST)  

Choose Probability Threshold For Hybrid method:  

Choose peptide fragment length:
Select Visualization approach: Graphical   Tabular  

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