Designing of HLA-DRB1*04:01 Binder

The "Design Module" is developed for producing all the possible alternate/mutants of the submitted protein. The new peptides will formed by mutating a single residue at a time. It can also provide a prediction score based on the selected model, to identify the peptide which can be a binder of HLA-DRB1*04:01 allele. Users can also sort the prediction score to find the highest scored/best mutated peptide, which can be a binder. Please visit Help page, for more information.

Type or paste peptide sequence(s) in FASTA format:
    


OR   Submit sequence file:
Select Prediction Method:       DPC based   Hybrid (DPC + BLAST)  
Choose Probability Threshold For Hybrid method:  
Physicochemical Properties to Be Displayed :
 Amphipathicity    Charge    Hydropathicity    Hydrophilicity    Hydrophobicity  
 Molecular weight    Net Hydrogen    pI    Side bulk    Steric hinderance  


Raghava's group       HLA-DR4Pred       HLAncPred       ProPred       ProPred1      

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