Protein Scan: Identify celiac disease inducing peptides or regions within a protein sequence

    

With the help of "Protein Scan" module, the user can recognize the important regions in the protein sequence, producing celiac disease inducing peptides. These celiac disease inducing regions may be removed or altered for subunit vaccine designing. Additionally, users can also identify novel celiac disease inducing peptides in the given protein sequence. Further, the user can select the length of the peptide sequences fragment to predict celiac disease inducing/non-inducing peptides. Please visit Help page, for more help.

Type or paste peptide sequence(s) in FASTA format:



OR   Submit sequence file:  

Choose peptide fragment length:

Select prediction method: Main (Disease Vs Random)   Alternate (Disease Vs Non-Disease)  
Choose Probability Threshold For Main Model:  

Select Visualization approach: Tabular   Graphical  

Physicochemical Properties to Be Displayed :

 Hydrophobicity    Steric hinderance    Side bulk    Hydropathicity    Amphipathicity   

 Hydrophilicity     Net Hydrogen     Charge     pI     Molecular weight