BULGES types dataset creation module

This page allows users to extract PDB chain IDs containing bulges types (Five types). Input for both sub modules is number of Bulges present in protein chain.

Please upload your file. Do upload more than 1 PDB chain ids.

Upload a PDB chain ID list file:     Example file: pdbid_list

(For Example: PDB 2v0lA has total 3 buldge type B present. To get all PDB chains having at least 1 buldge turns type B and maximum 3 buldge type B. Please enter the range as 1 To 3. Default is 0 To 200). For more information click help

Buldge Type	Range of Buldge in PDBs
	Minimum	Maximum
Type B
Type C
Type G
Type S
Type W

NOTE:

if you have enter range for more than one type of buldge . The result file contains PDB chain ID which are common. Example: if you have enter range for type I as 0 To 4 and for type IV 0 To 4. PDB chain 10gsA as 4 type I and 2 type IV . PDB chain ID 109mA has 3 type I and None type IV . In the result file we will get only 10gsA ID. As 10gsA statisfy both the above said condition, whereas 109mA satisfy only one condition (first condition), so its removed from the result. The more the number of type you select the lesser the number of PDB chain IDs you will get.