Home Page of cancerCSP
CancerCSP (clear cell renal cancer stage prediction) is a web-bench developed for predicting Early and Late stage of clear cell renal cell carcinoma (ccRCC) patients using gene expression data derived from RNA-seq experiments in the form of RNA-Seq by Expectation Maximization (RSEM) values. The user can also analyze data regarding expression of a gene in early and late stage of ccRCC for any gene among 20,531 genes included in TCGA analysis. The models used in this study were trained on TCGA genomics Level 3 data for cancer patients of 519 cancer patients. We are able to discriminate early and late stage patients with accuracy of 72.64% with ROC of 0.78 on validation dataset.