Target : Surface protein

Total records found: 41

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AptBacDB_ID ⇅ PMID/DOI ⇅ Year ⇅ Title ⇅ Aptamer name ⇅ Sequence (5′ to 3′) ⇅ Length ⇅ Library ⇅ Type ⇅ Target Organism ⇅ Target ⇅ Objective/Mechanism ⇅ Outcome/Inhibitory effect ⇅ No. of selection round SELEX ⇅ Determination of affinity method ⇅ Kd value ⇅ Activity Role ⇅ Method ⇅ Modification ⇅ Cytotoxicity (cell viability) ⇅ Stability⇅ Potential Candidate ⇅ Half-life ⇅ Patent ⇅
ABdb_0042 188033932008Selection of aptamers against live bacterial cellshemag1PAGCAGCACAGAGGTCAGATG-TAGCCCTTCAACATAGTAATATCTCTGCATTCTGTGTG-CCTATGCGTGCTACCGTGAA785'-AGCAGCACAGAGGTCAGATG-40N-CCTATGCGTGCTACCGTGAA-3'ssDNALactobacillum Acidophilius (ATCC 4356)Surface protein (S-layer protein)Identify aptamers that bind only specifically to cells with S-layers composed of similar S-proteins (L. acidophilus 4355, 4356, and 4357) and not to other cells (E. coli, S. bovis, and S. cerevisiae).The number of aptamer molecules binding to each cell (on average, ∼164 ± 47 aptamer molecules per cell).8Flow Cytometry13 ± 3 nMDetectionSELEX5'-FAM LabeledN/AN/ABest CandidateN/AN/A
ABdb_0043 188033932008Selection of aptamers against live bacterial cellshemag1TAGCCCTTCAACATAGTAATATCTCTGCATTCTGTGATG395'-AGCAGCACAGAGGTCAGATG-40N-CCTATGCGTGCTACCGTGAA-3'ssDNALactobacillum Acidophilius (ATCC 4356)Surface protein (S-layer protein)Identify aptamers that bind only specifically to cells with S-layers composed of similar S-proteins (L. acidophilus 4355, 4356, and 4357) and not to other cells (E. coli, S. bovis, and S. cerevisiae).N/A8Flow CytometryN/ADetectionSELEX5'-FAM LabeledN/AN/AN/AN/AN/A
ABdb_0044 188033932008Selection of aptamers against live bacterial cellsmag1TGAGCCCCACTAAAGTTGCAATCATGTCGTCAGCTTTGGG405'-AGCAGCACAGAGGTCAGATG-40N-CCTATGCGTGCTACCGTGAA-3'ssDNALactobacillum Acidophilius (ATCC 4356)Surface protein (S-layer protein)Identify aptamers that bind only specifically to cells with S-layers composed of similar S-proteins (L. acidophilus 4355, 4356, and 4357) and not to other cells (E. coli, S. bovis, and S. cerevisiae).N/A8Flow CytometryN/ADetectionSELEX5'-FAM LabeledN/AN/AN/AN/AN/A
ABdb_0045 188033932008Selection of aptamers against live bacterial cellshemag3CGTCGCGGCATATTTCCAGTGGAACGGTTACGATATGTTG405'-AGCAGCACAGAGGTCAGATG-40N-CCTATGCGTGCTACCGTGAA-3'ssDNALactobacillum Acidophilius (ATCC 4356)Surface protein (S-layer protein)Identify aptamers that bind only specifically to cells with S-layers composed of similar S-proteins (L. acidophilus 4355, 4356, and 4357) and not to other cells (E. coli, S. bovis, and S. cerevisiae).N/A8Flow CytometryN/ADetectionSELEX5'-FAM LabeledN/AN/AN/AN/AN/A
ABdb_0046 188033932008Selection of aptamers against live bacterial cellsmag1PAGCAGCACAGAGGTCAGATG-TGAGCCCCAGTAAAGTTGCAATCATGTCGTCAGCTTTGGG-CCTATGCGTGCTACCGTGAA805'-AGCAGCACAGAGGTCAGATG-40N-CCTATGCGTGCTACCGTGAA-3'ssDNALactobacillum Acidophilius (ATCC 4356)Surface protein (S-layer protein)Identify aptamers that bind only specifically to cells with S-layers composed of similar S-proteins (L. acidophilus 4355, 4356, and 4357) and not to other cells (E. coli, S. bovis, and S. cerevisiae).N/A8Flow CytometryN/ADetectionSELEX5'-FAM LabeledN/AN/AN/AN/AN/A
ABdb_0047 188033932008Selection of aptamers against live bacterial cellshemag3PAGCAGCACAGAGGTCAGATG-TCGTCGCGGCATATTTCCAGTGGAACGGTTACGATATGTTG-CCTATGCGTGCTACCGTGAA815'-AGCAGCACAGAGGTCAGATG-40N-CCTATGCGTGCTACCGTGAA-3'ssDNALactobacillum Acidophilius (ATCC 4356)Surface protein (S-layer protein)Identify aptamers that bind only specifically to cells with S-layers composed of similar S-proteins (L. acidophilus 4355, 4356, and 4357) and not to other cells (E. coli, S. bovis, and S. cerevisiae).N/A8Flow CytometryN/ADetectionSELEX5'-FAM LabeledN/AN/AN/AN/AN/A
ABdb_0427 242800492014Aptamer cocktails: enhancement of sensing signals compared to single use of aptamers for detection of bacteriaE1GCAATGGTACGGTACTTCCACTTAGGTCGAGGTTAGTTTGTCTTGCTGGCGCATCCACTGAGCGCAAAAGTGCACGCTACTTTGCTAA88N/AssDNAEscherichia Coli (E. Coli) (KCTC 2571)Surface proteinDeveloped an aptamer cocktail with different components on the cell surface to enhance the sensing signal for bacterial detection.In electrochemical detection, the cocktail achieved an approximately 3.7 × 10^2 CFU/mL LOD (18-fold lower than the average single aptamer).N/AN/A12.4 nMBiosensorN/A5'-FAM Labeled and 3'-Amidation (NH₂)N/AN/AN/AN/AN/A
ABdb_0428 242800492014Aptamer cocktails: enhancement of sensing signals compared to single use of aptamers for detection of bacteriaE2GCAATGGTACGGTACTTCCCCATGAGTGTTGTGAAATGTTGGGACACTAGGTGGCATAGAGCCGCAAAAGTGCACGCTACTTTGCTAA88N/AssDNAEscherichia Coli (E. Coli) (KCTC 2571)Surface proteinDeveloped an aptamer cocktail with different components on the cell surface to enhance the sensing signal for bacterial detection.In electrochemical detection, the cocktail achieved an approximately 3.7 × 10^2 CFU/mL LOD (18-fold lower than the average single aptamer).N/AN/A25.2 nMBiosensorN/A5'-FAM Labeled and 3'-Amidation (NH₂)N/AN/AN/AN/AN/A
ABdb_0429 242800492014Aptamer cocktails: enhancement of sensing signals compared to single use of aptamers for detection of bacteriaE10GCAATGGTACGGTACTTCCGTTGCACTGTGCGGCCGAGCTGCCCCCTGGTTTGTGAATACCCTGGGCAAAAGTGCACGCTACTTTGCTAA90N/AssDNAEscherichia Coli (E. Coli) (KCTC 2571)Surface proteinDeveloped an aptamer cocktail with different components on the cell surface to enhance the sensing signal for bacterial detection.In electrochemical detection, the cocktail achieved an approximately 3.7 × 10^2 CFU/mL LOD (18-fold lower than the average single aptamer).N/AN/A14.2 nMBiosensorN/A5'-FAM Labeled and 3'-Amidation (NH₂)N/AN/AN/AN/AN/A
ABdb_1121 301871422018Colorimetric aptasensor for Campylobacter jejuni cells by exploiting the peroxidase like activity of Au@Pd nanoparticlesaptamerGCAAGATCTCCGAGATATCGTGCTGGGGGGTGGTTTGTTTGGGTCGGTTGTTTTGGTTGGGCTGCAGGTAATACGTATACT81N/AssDNACampylobacter JejuniSurface proteinDevelop a colorimetric aptasensor based on an aptamer and Au@Pd NPs peroxidase for the determination of C. jejuni in the milk sample.The Limit of Detection (LOD) achieved was 10 CFU/mL in phosphate-buffered saline and 100 CFU/mL in milk samples with a linear range from 10 to 10(6) CFU/mL.N/AN/AN/ABiosensorN/AN/AN/AN/AN/AN/AN/A
ABdb_1122 296494752018Use of DNA aptamer for sandwich type detection of Listeria monocytogenesLM6-116AGTATACGTATTACCTGCAGCTACTCGTTATTTCGTAGCACTTTTCCCCACCACCTTGGTGCGATATCTCGGAGATCTTGC81N/AssDNAListeria Monocytogenes (ATCC 19115)Surface proteinDevelop a two-site binding sandwich assay for capture and detection of L. monocytogenes.Display LOD of 2.5 CFU L. monocytogenes in 500 μl buffer and 10 CFU/25 g turkey deli meat sample.N/AN/A74.4 ± 52.69 nMBiosensorN/A5'-FAM LabeledN/AN/AN/AN/AN/A
ABdb_1123 294140892018A sensitive Potentiometric resolved ratiometric Photoelectrochemical aptasensor for Escherichia coli detection fabricated with non-metallic nanomaterialsE. coli aptamerGCAATGGTACGGTACTTCCCCATGAGTGTTGTGAAATGTTGGGACACTAGGTGGCATAGAGCCGCAAAAGTGCACGCTACTTTGCTAA88N/AssDNAEscherichia Coli (E. Coli)Surface proteinDevelops a sensitive potentiometric resolved ratiometric photoelectrochemical aptasensor for the detection of E. coli.Achieved an extremely low detection limit (LOD) of 0.66 cfu/mL and showed a wide linear range (2.9 cfu/mL to 2.9 × 10(6) cfu/mL).N/AN/AN/ABiosensorN/A3'-Amidation (NH₂-(CH2)6)N/AN/AN/AN/AN/A
ABdb_1200 295338182018Culture-free, highly sensitive, quantitative detection of bacteria from minimally processed samples using fluorescence imaging by smartphoneS. aureus–specific aptamer (Sap)TCCCTACGGCGCTAACCCCCCCAGTCCGTCCTCCCAGCCTCACACCGCCACCGTGCTACAAC62N/AssDNAStaphylococcus aureus (S. aureus) (USA300)Surface proteinDeveloped a smartphone-based detection using aptamer-functionalized fluorescent magnetic nanoparticles (FMNPs) for Staphylococcus aureus.Showed a minimum detectable concentration as low as 10 cfu/ml in a peanut milk sample within 10 min.N/AN/A3.03 nMBiosensorN/A5'-COOH (Carboxylated)N/AN/AN/AN/AN/A
ABdb_1439 317262722020CdS quantum dots/Au nanoparticles/ZnO nanowire array for self-powered photoelectrochemical detection of Escherichia coli O157:H7E. coli aptamerATCCGTCACACCTGCTCTACTGGCCGGCTCAGCATGACTAAGAAGGAAGTTATGTGGTGTTGGCTCCCGTAT72N/AssDNAEscherichia Coli (E. Coli) O157:H7Surface proteinDeveloped a photoelectrochemical (PEC) platform (CdS QDs/Au NPs/ZnO NWs) for the detection of E. coli O157:H7.Exhibited a wide linear range of 10-10(7) CFU/mL with the detection limit as low as 1.125 CFU/mL.N/AN/AN/ABiosensorN/A5'-ThiolatedN/AAfter 15 days, the PEC aptasensor still retained 87% of its initial sensitivity.N/AN/AN/A
ABdb_1642 351046732022An antigen-targeting assay for Lyme disease: Combining aptamers and SERS to detect the OspA proteinIon-OspA-59CATGACACCGTACCTGCTCT-TGCTTTTCGTGCGCGCATAAAATACCTTGATACTGTGCCGTATGAAAGCG-AAGCACGCCAGGGACTATTA905'-CATGACACCGTACCTGCTCT-N50-AAGCACGCCAGGGACTATTA-3'ssDNABorrelia BurgdorferiOuter Surface Protein A (OspA)Develop SERS-based aptasensor to detect OspA in serum samples.OspA limit-of-detection determined to be 1 × 10−4 ng/mL with 91% sensitivity and 96% specificity.10Fluorescence anisotropy (FA)2.18 nMBiosensorRAPID-SELEX5'-DTPA dithiol and T at 86 position is replaced by 5-Octadiynyl dU moeityN/AN/ABest CandidateN/AN/A
ABdb_1643 351046732022An antigen-targeting assay for Lyme disease: Combining aptamers and SERS to detect the OspA proteinIon-OspA-21CATGACACCGTACCTGCTCT-AATAAGCACGCCAGGGACTATTAGATCGGAATAGCACACGTCTGAACTCC-AAGCACGCCAGGGACTATTA905'-CATGACACCGTACCTGCTCT-N50-AAGCACGCCAGGGACTATTA-3'ssDNABorrelia BurgdorferiOuter Surface Protein A (OspA)Develop SERS-based aptasensor to detect OspA in serum samples.N/A10Fluorescence anisotropy (FA)N/ABiosensorRAPID-SELEX5'-DTPA dithiol and T at 86 position is replaced by 5-Octadiynyl dU moeityN/AN/AN/AN/AN/A
ABdb_1644 351046732022An antigen-targeting assay for Lyme disease: Combining aptamers and SERS to detect the OspA proteinIon-OspA-46CATGACACCGTACCTGCTCT-AATAAGCACGCCAGGGACTATTAGATCGGAAGAGCACACGTGTGAACTCC-AAGCACGCCAGGGACTATTA905'-CATGACACCGTACCTGCTCT-N50-AAGCACGCCAGGGACTATTA-3'ssDNABorrelia BurgdorferiOuter Surface Protein A (OspA)Develop SERS-based aptasensor to detect OspA in serum samples.N/A10Fluorescence anisotropy (FA)N/ABiosensorRAPID-SELEX5'-DTPA dithiol and T at 86 position is replaced by 5-Octadiynyl dU moeityN/AN/AN/AN/AN/A
ABdb_1645 351046732022An antigen-targeting assay for Lyme disease: Combining aptamers and SERS to detect the OspA proteinIon-OspA-22CATGACACCGTACCTGCTCT-ACGAGATTCAAGCACTCCAGGGACTATTAGATCGGAAGAGCACACGTCTG-AAGCACGCCAGGGACTATTA905'-CATGACACCGTACCTGCTCT-N50-AAGCACGCCAGGGACTATTA-3'ssDNABorrelia BurgdorferiOuter Surface Protein A (OspA)Develop SERS-based aptasensor to detect OspA in serum samples.N/A10Fluorescence anisotropy (FA)N/ABiosensorRAPID-SELEX5'-DTPA dithiol and T at 86 position is replaced by 5-Octadiynyl dU moeityN/AN/AN/AN/AN/A
ABdb_1646 351046732022An antigen-targeting assay for Lyme disease: Combining aptamers and SERS to detect the OspA proteinIon-OspA-39CATGACACCGTACCTGCTCT-ACGAGATTCAAGCACGCCAGGGATTATTAGATCGGAAGAGCACACGTCTG-AAGCACGCCAGGGACTATTA905'-CATGACACCGTACCTGCTCT-N50-AAGCACGCCAGGGACTATTA-3'ssDNABorrelia BurgdorferiOuter Surface Protein A (OspA)Develop SERS-based aptasensor to detect OspA in serum samples.N/A10Fluorescence anisotropy (FA)N/ABiosensorRAPID-SELEX5'-DTPA dithiol and T at 86 position is replaced by 5-Octadiynyl dU moeityN/AN/AN/AN/AN/A
ABdb_1647 351046732022An antigen-targeting assay for Lyme disease: Combining aptamers and SERS to detect the OspA proteinIon-OspA-55CATGACACCGTACCTGCTCT-TGCTTTTCGTGCGCGCATAAAATACTTTGATACTGTGCCGGATGAAAGCG-AAGCACGCCAGGGACTATTA905'-CATGACACCGTACCTGCTCT-N50-AAGCACGCCAGGGACTATTA-3'ssDNABorrelia BurgdorferiOuter Surface Protein A (OspA)Develop SERS-based aptasensor to detect OspA in serum samples.N/A10Fluorescence anisotropy (FA)N/ABiosensorRAPID-SELEX5'-DTPA dithiol and T at 86 position is replaced by 5-Octadiynyl dU moeityN/AN/AN/AN/AN/A
ABdb_1748 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt1ATCCAGAGTGACGCAGCA-TGGGACGGTGCGGGGGAGGAGGATGAGCGTGGTCGTTGGGTGGCTGCCGC-AATGTCGTTGGTGGCCC855'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence Spectroscopy214.4 nMBiosensorWhole Cell-SELEXFAM LabeledN/AN/AN/AN/AN/A
ABdb_1749 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt1_RCATCCAGAGTGACGCAGCA-GCGGCAGCCACCCAACGACCACGCTCATCCTCCTCCCCCGCACCGTCCCA-AATGTCGTTGGTGGCCC855'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.Using SWV, exhibiting a linear detection range of 4.0 × 10(4)–7.0 × 10(7) CFU/mL, and a limit of detection of 4.0 × 10(4) CFU/mL at pH 5.0.8Fluorescence Spectroscopy3.4 nMBiosensorWhole Cell-SELEXFAM Labeled and ThiolatedN/AN/ABest CandidateN/AN/A
ABdb_1750 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt2ATCCAGAGTGACGCAGCA-TGTGGGGGCATGGGAAGGTGGGTAAGCCGTTGCGTGGGATGTGGCGGGTC-AATGTCGTTGGTGGCCC855'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence SpectroscopyN/ABiosensorWhole Cell-SELEXN/AN/AN/AN/AN/AN/A
ABdb_1751 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt2_RCATCCAGAGTGACGCAGCA-GACCCGCCACATCCCACGCAACGGCTTACCCACCTTCCCATGCCCCCACA-AATGTCGTTGGTGGCCC855'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence SpectroscopyN/ABiosensorWhole Cell-SELEXN/AN/AN/AN/AN/AN/A
ABdb_1752 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt3ATCCAGAGTGACGCAGCA-TGGGGCGAAGGACGGTGGATGTGTGTAGGCGCGGGTGGGTCGCACGGGGT-AATGTCGTTGGTGGCCC855'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence SpectroscopyN/ABiosensorWhole Cell-SELEXN/AN/AN/AN/AN/AN/A
ABdb_1753 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt3_RCATCCAGAGTGACGCAGCA-ACCCCGTGCGACCCACCCGCGCCTACACACATCCACCGTCCTTCGCCCCA-AATGTCGTTGGTGGCCC855'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence SpectroscopyN/ABiosensorWhole Cell-SELEXN/AN/AN/AN/AN/AN/A
ABdb_1754 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt4ATCCAGAGTGACGCAGCA-TGACAGACGGGAGAGACACGACGGGGGCGGGGAGTGAGAAGCGCGCGCTG-AATGTCGTTGGTGGCCC855'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence SpectroscopyN/ABiosensorWhole Cell-SELEXN/AN/AN/AN/AN/AN/A
ABdb_1755 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt4_RCATCCAGAGTGACGCAGCA-CAGCGCGCGCTTCTCACTCCCCGCCCCCGTCGTGTCTCTCCCGTCTGTCA-AATGTCGTTGGTGGCCC855'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence SpectroscopyN/ABiosensorWhole Cell-SELEXN/AN/AN/AN/AN/AN/A
ABdb_1756 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt5ATCCAGAGTGACGCAGCA-TGTGGCGGTGGCAAGGTCGGTGGGTGCGGCGGCGTACCGGTGGTGGGGGG-AATGTCGTTGGTGGCCC855'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence SpectroscopyN/ABiosensorWhole Cell-SELEXN/AN/AN/AN/AN/AN/A
ABdb_1757 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt5_RCATCCAGAGTGACGCAGCA-CCCCCCACCACCGGTACGCCGCCGCACCCACCGACCTTGCCACCGCCACA-AATGTCGTTGGTGGCCC855'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence SpectroscopyN/ABiosensorWhole Cell-SELEXN/AN/AN/AN/AN/AN/A
ABdb_1758 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt6ATCCAGAGTGACGCAGCA-TGACCGGCGGGGGGTGGTTCGCTGATAGGGCGTGTGGACCGGGGGTCGCA-AATGTCGTTGGTGGCCC855'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence SpectroscopyN/ABiosensorWhole Cell-SELEXN/AN/AN/AN/AN/AN/A
ABdb_1759 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt6_RCATCCAGAGTGACGCAGCA-TGCGACCCCCGGTCCACACGCCCTATCAGCGAACCACCCCCCGCCGGTCA-AATGTCGTTGGTGGCCC855'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence SpectroscopyN/ABiosensorWhole Cell-SELEXN/AN/AN/AN/AN/AN/A
ABdb_1760 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt7ATCCAGAGTGACGCAGCA-TGGGCGGGTAGTGGGGCAACGTGAGCGCGTGGGGTGTGGCAGGCGTGGCT-AATGTCGTTGGTGGCCC855'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence SpectroscopyN/ABiosensorWhole Cell-SELEXN/AN/AN/AN/AN/AN/A
ABdb_1761 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt7_RCATCCAGAGTGACGCAGCA-AGCCACGCCTGCCACACCCCACGCGCTCACGTTGCCCCACTACCCGCCCA-AATGTCGTTGGTGGCCC855'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence SpectroscopyN/ABiosensorWhole Cell-SELEXN/AN/AN/AN/AN/AN/A
ABdb_1762 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt8ATCCAGAGTGACGCAGCA-AGATGACTTAGGGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT-AATGTCGTTGGTGGCCC815'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence SpectroscopyN/ABiosensorWhole Cell-SELEXN/AN/AN/AN/AN/AN/A
ABdb_1763 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt8_RCATCCAGAGTGACGCAGCA-AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCCTAAGTCATCT-AATGTCGTTGGTGGCCC815'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence SpectroscopyN/ABiosensorWhole Cell-SELEXN/AN/AN/AN/AN/AN/A
ABdb_1764 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt9ATCCAGAGTGACGCAGCA-AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGTCATCGAGTGTA-AATGTCGTTGGTGGCCC815'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence SpectroscopyN/ABiosensorWhole Cell-SELEXN/AN/AN/AN/AN/AN/A
ABdb_1765 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt9_RCATCCAGAGTGACGCAGCA-TACACTCGATGACACACTCTTTCCCTACACGACGCTCTTCCGATCT-AATGTCGTTGGTGGCCC815'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence SpectroscopyN/ABiosensorWhole Cell-SELEXN/AN/AN/AN/AN/AN/A
ABdb_1766 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt10ATCCAGAGTGACGCAGCA-TGGGTGTGGTGGCGCGGGTGGCGTGGTGCGTGTACAGCTGGTTGCGGGCG-AATGTCGTTGGTGGCCC855'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence SpectroscopyN/ABiosensorWhole Cell-SELEXN/AN/AN/AN/AN/AN/A
ABdb_1767 368296722023Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2Apt10_RCATCCAGAGTGACGCAGCA-CGCCCGCAACCAGCTGTACACGCACCACGCCACCCGCGCCACCACACCCA-AATGTCGTTGGTGGCCC855'-ATCCAGAGTGACGCAGCA-N50-AATGTCGTTGGTGGCCC-3'ssDNAMoraxella Catarrhalis (Bc5)Ubiquitous Surface Protein A2 (UspA2)Identify aptamers against and develop an electrochemical biosensor functionalized with an aptamer as a bioreceptor to detect UspA2.N/A8Fluorescence SpectroscopyN/ABiosensorWhole Cell-SELEXN/AN/AN/AN/AN/AN/A
ABdb_1957 190528512009Plastic-adherent DNA aptamer-magnetic bead and quantum dot sandwich assay for Campylobacter detectionC2 and C3N/AN/AN/AssDNACampylobacter Jejuni (ATCC 29428)Surface proteinIdentify aptamers against surface proteins from C. jejuni and develop a sandwich assay ( (C2 aptamer-MB-bacteria-C3 aptamer-QD complexes) for its detection.Exhibits detection limits as low as an average of 2.5 cfu equivalents in buffer and 10–250 cfu in various food matrices.5N/AN/ABiosensorSELEX5'-Amidation (NH₂)N/AN/AN/AN/AN/A