Target : Molecular recognition element (MRE) targeting alpha toxin

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AptBacDB_ID ⇅ PMID/DOI ⇅ Year ⇅ Title ⇅ Aptamer name ⇅ Sequence (5′ to 3′) ⇅ Length ⇅ Library ⇅ Type ⇅ Target Organism ⇅ Target ⇅ Objective/Mechanism ⇅ Outcome/Inhibitory effect ⇅ No. of selection round SELEX ⇅ Determination of affinity method ⇅ Kd value ⇅ Activity Role ⇅ Method ⇅ Modification ⇅ Cytotoxicity (cell viability) ⇅ Stability⇅ Potential Candidate ⇅ Half-life ⇅ Patent ⇅
ABdb_0644 256331022015In vitro selection of single-stranded DNA molecular recognition elements against S. aureus alpha toxin and sensitive detection in human serumR12.06TGTACCGTCTGAGCGATTCGTAC-GATTACTATAATTTCCTATCGTCCGACCGCCGTC-AGCCAGTCAGTGTTAAGGAGTGC805'-TGTACCGTCTGAGCGATTCGTAC-34N-AGCCAGTCAGTGTTAAGGAGTGC-3'ssDNAStaphylococcus aureus (S. aureus)Molecular recognition element (MRE) targeting alpha toxinIdentify aptamer against MRE and develop modified sandwich ELISA to detect alpha toxin in undiluted human serum samples.Display a sensitive detection of 200 nM alpha toxin.12Surface Plasmon Resonance (SPR)93.7 ± 7.0 nMDetectionSELEX5'-Amidation (NH₂-(CH2)6) or 5'-FAM LabeledN/AN/AN/AAverage half-life of ssDNA MREs in serum is about one hour.N/A
ABdb_0645 256331022015In vitro selection of single-stranded DNA molecular recognition elements against S. aureus alpha toxin and sensitive detection in human serumR12.26TGTACCGTCTGAGCGATTCGTAC-CCTTGCCGATGCCTTTACGGTCTAGTTTGGATGT-AGCCAGTCAGTGTTAAGGAGTGC805'-TGTACCGTCTGAGCGATTCGTAC-34N-AGCCAGTCAGTGTTAAGGAGTGC-3'ssDNAStaphylococcus aureus (S. aureus)Molecular recognition element (MRE) targeting alpha toxinIdentify aptamer against MRE and develop modified sandwich ELISA to detect alpha toxin in undiluted human serum samples.N/A12Surface Plasmon Resonance (SPR)N/ADetectionSELEX5'-Amidation (NH₂-(CH2)6)N/AN/ABest CandidateN/AN/A
ABdb_0646 256331022015In vitro selection of single-stranded DNA molecular recognition elements against S. aureus alpha toxin and sensitive detection in human serumR12.01TGTACCGTCTGAGCGATTCGTAC-TCGGGCGATGATACTTAGCACGGTCTAGGTCAAA-AGCCAGTCAGTGTTAAGGAGTGC805'-TGTACCGTCTGAGCGATTCGTAC-34N-AGCCAGTCAGTGTTAAGGAGTGC-3'ssDNAStaphylococcus aureus (S. aureus)Molecular recognition element (MRE) targeting alpha toxinIdentify aptamer against MRE and develop modified sandwich ELISA to detect alpha toxin in undiluted human serum samples.N/A12Surface Plasmon Resonance (SPR)N/ADetectionSELEX5'-Amidation (NH₂-(CH2)6)N/AN/AN/AN/AN/A
ABdb_0647 256331022015In vitro selection of single-stranded DNA molecular recognition elements against S. aureus alpha toxin and sensitive detection in human serumR12.20TGTACCGTCTGAGCGATTCGTAC-TAGCGGCAGAGTAGCACTCTATAGGTCGATGTTT-AGCCAGTCAGTGTTAAGGAGTGC805'-TGTACCGTCTGAGCGATTCGTAC-34N-AGCCAGTCAGTGTTAAGGAGTGC-3'ssDNAStaphylococcus aureus (S. aureus)Molecular recognition element (MRE) targeting alpha toxinIdentify aptamer against MRE and develop modified sandwich ELISA to detect alpha toxin in undiluted human serum samples.N/A12Surface Plasmon Resonance (SPR)N/ADetectionSELEX5'-Amidation (NH₂-(CH2)6)N/AN/AN/AN/AN/A
ABdb_0648 256331022015In vitro selection of single-stranded DNA molecular recognition elements against S. aureus alpha toxin and sensitive detection in human serumR12.02TGTACCGTCTGAGCGATTCGTAC-CGTGTCCTATTTTCTTCTCTGTTAACTCTCGTC-AGCCAGTCAGTGTTAAGGAGTGC795'-TGTACCGTCTGAGCGATTCGTAC-34N-AGCCAGTCAGTGTTAAGGAGTGC-3'ssDNAStaphylococcus aureus (S. aureus)Molecular recognition element (MRE) targeting alpha toxinIdentify aptamer against MRE and develop modified sandwich ELISA to detect alpha toxin in undiluted human serum samples.N/A12Surface Plasmon Resonance (SPR)N/ADetectionSELEX5'-Amidation (NH₂-(CH2)6)N/AN/AN/AN/AN/A
ABdb_0649 256331022015In vitro selection of single-stranded DNA molecular recognition elements against S. aureus alpha toxin and sensitive detection in human serumR12.06TGTACCGTCTGAGCGATTCGTAC-GATTACTATAATTTCTTATCGTCCGACCGCCGTC-AGCCAGTCAGTGTTAAGGAGTGC805'-TGTACCGTCTGAGCGATTCGTAC-34N-AGCCAGTCAGTGTTAAGGAGTGC-3'ssDNAStaphylococcus aureus (S. aureus)Molecular recognition element (MRE) targeting alpha toxinIdentify aptamer against MRE and develop modified sandwich ELISA to detect alpha toxin in undiluted human serum samples.N/A12Surface Plasmon Resonance (SPR)N/ADetectionSELEX5'-Amidation (NH₂-(CH2)6)N/AN/AN/AN/AN/A
ABdb_0650 256331022015In vitro selection of single-stranded DNA molecular recognition elements against S. aureus alpha toxin and sensitive detection in human serumR12.39TGTACCGTCTGAGCGATTCGTAC-TTTGATCTCGTGTGTCTAGTTGCGGCGGATTGTC-AGCCAGTCAGTGTTAAGGAGTGC805'-TGTACCGTCTGAGCGATTCGTAC-34N-AGCCAGTCAGTGTTAAGGAGTGC-3'ssDNAStaphylococcus aureus (S. aureus)Molecular recognition element (MRE) targeting alpha toxinIdentify aptamer against MRE and develop modified sandwich ELISA to detect alpha toxin in undiluted human serum samples.N/A12Surface Plasmon Resonance (SPR)N/ADetectionSELEX5'-Amidation (NH₂-(CH2)6)N/AN/AN/AN/AN/A
ABdb_0651 256331022015In vitro selection of single-stranded DNA molecular recognition elements against S. aureus alpha toxin and sensitive detection in human serumR12.10TGTACCGTCTGAGCGATTCGTAC-GGTCAACCTCACCGACTGCCGACCGTTTAATTCG-AGCCAGTCAGTGTTAAGGAGTGC805'-TGTACCGTCTGAGCGATTCGTAC-34N-AGCCAGTCAGTGTTAAGGAGTGC-3'ssDNAStaphylococcus aureus (S. aureus)Molecular recognition element (MRE) targeting alpha toxinIdentify aptamer against MRE and develop modified sandwich ELISA to detect alpha toxin in undiluted human serum samples.N/A12Surface Plasmon Resonance (SPR)N/ADetectionSELEX5'-Amidation (NH₂-(CH2)6)N/AN/AN/AN/AN/A
ABdb_0652 256331022015In vitro selection of single-stranded DNA molecular recognition elements against S. aureus alpha toxin and sensitive detection in human serumR12.43TGTACCGTCTGAGCGATTCGTAC-CGTCATTGCCTCGTAGTATTCTTATAGTCGGTAG-AGCCAGTCAGTGTTAAGGAGTGC805'-TGTACCGTCTGAGCGATTCGTAC-34N-AGCCAGTCAGTGTTAAGGAGTGC-3'ssDNAStaphylococcus aureus (S. aureus)Molecular recognition element (MRE) targeting alpha toxinIdentify aptamer against MRE and develop modified sandwich ELISA to detect alpha toxin in undiluted human serum samples.N/A12Surface Plasmon Resonance (SPR)N/ADetectionSELEX5'-Amidation (NH₂-(CH2)6)N/AN/AN/AN/AN/A
ABdb_0653 256331022015In vitro selection of single-stranded DNA molecular recognition elements against S. aureus alpha toxin and sensitive detection in human serumR12.44TGTACCGTCTGAGCGATTCGTAC-TCCCGAAAGCGCGTCAGCCTGGGAGGTTATGCGG-AGCCAGTCAGTGTTAAGGAGTGC805'-TGTACCGTCTGAGCGATTCGTAC-34N-AGCCAGTCAGTGTTAAGGAGTGC-3'ssDNAStaphylococcus aureus (S. aureus)Molecular recognition element (MRE) targeting alpha toxinIdentify aptamer against MRE and develop modified sandwich ELISA to detect alpha toxin in undiluted human serum samples.N/A12Surface Plasmon Resonance (SPR)N/ADetectionSELEX5'-Amidation (NH₂-(CH2)6)N/AN/AN/AN/AN/A