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| AptBacDB_ID ⇅ | PMID/DOI ⇅ | Year ⇅ | Title ⇅ | Aptamer name ⇅ | Sequence (5′ to 3′) ⇅ | Length ⇅ | Library ⇅ | Type ⇅ | Target Organism ⇅ | Target ⇅ | Objective/Mechanism ⇅ | Outcome/Inhibitory effect ⇅ | No. of selection round SELEX ⇅ | Determination of affinity method ⇅ | Kd value ⇅ | Activity Role ⇅ | Method ⇅ | Modification ⇅ | Cytotoxicity (cell viability) ⇅ | Stability⇅ | Potential Candidate ⇅ | Half-life ⇅ | Patent ⇅ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ABdb_0405 | 24813997 | 2014 | Selection of RNA aptamers against the M. tuberculosis EsxG protein using surface plasmon resonance-based SELEX | G43 | UAAUACGACUCACUAUAGGGAGACAAGACUAGACGCUCAA-AAUAGGAACUUAGAACAACCCUCUCCCUCAUGUAGCGAACCCGAACCAGG-UUCGACAUGAGACUCACAACAGUUCCCUUUAGUGAGGGUUAAUU | 134 | N/A | ssRNA | Mycobacterium Tuberculosis (H37Rv) | EsxG protein | Identify aptamers against EsxG over its homologue EsxA. | The affinity of aptamer G43 to EsxG was about ten times higher than the affinity of aptamer G78 and also showed no significant binding to EsxA. | 5 | Surface Plasmon Resonance (SPR) | 8.04 ± 1.9 nM | Detection | SPR based SELEX | N/A | N/A | N/A | Best Candidate | N/A | N/A |
| ABdb_0406 | 24813997 | 2014 | Selection of RNA aptamers against the M. tuberculosis EsxG protein using surface plasmon resonance-based SELEX | G78 | UAAUACGACUCACUAUAGGGAGACAAGACUAGACGCUCAA-GCGUUUAAACGUUGCACCGUCGUUGACGGGACCGCUUGAGACAUUCGCUC-UUCGACAUGAGACUCACAACAGUUCCCUUUAGUGAGGGUUAAUU | 134 | N/A | ssRNA | Mycobacterium Tuberculosis (H37Rv) | EsxG protein | Identify aptamers against EsxG over its homologue EsxA. | G78 showed some binding to EsxA, though a significantly lower binding signal was observed (p < 0.01) when compared to that of EsxG. | 5 | Surface Plasmon Resonance (SPR) | 78.85 ± 9.4 nM | Detection | SPR based SELEX | N/A | N/A | N/A | N/A | N/A | N/A |
| ABdb_0407 | 24813997 | 2014 | Selection of RNA aptamers against the M. tuberculosis EsxG protein using surface plasmon resonance-based SELEX | G31 | UAAUACGACUCACUAUAGGGAGACAAGACUAGACGCUCAA-UAACGACUCACCAACACAUCGACUAAUUUCCCUAAAUGACUUAACUGAAU-UUCGACAUGAGACUCACAACAGUUCCCUUUAGUGAGGGUUAAUU | 134 | N/A | ssRNA | Mycobacterium Tuberculosis (H37Rv) | EsxG protein | Identify aptamers against EsxG over its homologue EsxA. | N/A | 5 | Surface Plasmon Resonance (SPR) | N/A | Detection | SPR based SELEX | N/A | N/A | N/A | N/A | N/A | N/A |
| ABdb_0408 | 24813997 | 2014 | Selection of RNA aptamers against the M. tuberculosis EsxG protein using surface plasmon resonance-based SELEX | G70 | UAAUACGACUCACUAUAGGGAGACAAGACUAGACGCUCAA-ACUCGUGACACUUACGAACGACCUAUGGCGGGAGAAUCCUAGCCGCUACG-UUCGACAUGAGACUCACAACAGUUCCCUUUAGUGAGGGUUAAUU | 134 | N/A | ssRNA | Mycobacterium Tuberculosis (H37Rv) | EsxG protein | Identify aptamers against EsxG over its homologue EsxA. | N/A | 5 | Surface Plasmon Resonance (SPR) | N/A | Detection | SPR based SELEX | N/A | N/A | N/A | N/A | N/A | N/A |