AptBacterialDB

Method : AM X‐aptamer kit

Total records found: 9

Download:

Search:
AptBacDB_ID ⇅ PMID/DOI ⇅ Year ⇅ Title ⇅ Aptamer name ⇅ Sequence (5′ to 3′) ⇅ Length ⇅ Library ⇅ Type ⇅ Target Organism ⇅ Target ⇅ Objective/Mechanism ⇅ Outcome/Inhibitory effect ⇅ No. of selection round SELEX ⇅ Determination of affinity method ⇅ Kd value ⇅ Activity Role ⇅ Method ⇅ Modification ⇅ Cytotoxicity (cell viability) ⇅ Stability⇅ Potential Candidate ⇅ Half-life ⇅ Patent ⇅
ABdb_1444 327246452020Selection of aptamers targeted to food-borne pathogenic bacteria Vibrio parahaemolyticusS.184004.T1.01 (ID 5)TTTTTAAGCCCACAGACGWYCGGCAGGCACAGTYYGTCAAGGXCGYGCCATG52N/AssDNAVibrio Parahaemolyticus (ATCC 17802)Whole cellIdentify high‐affinity aptamers that specifically recognize Vp.N/A2Real-Time Quantitative Polymerase Chain Reaction (RT-qPCR)N/ADetectionAM X‐aptamer kitW = indole‐dU,Y = phenol‐dU,X = amine‐dU, five additional Ts at the 5'‐end, and 3'-CCATGN/AN/AN/AN/AN/A
ABdb_1445 327246452020Selection of aptamers targeted to food-borne pathogenic bacteria Vibrio parahaemolyticusS.184004.T1.02 (ID 6)TTTTTAAGCCCACCYCGCYGTGCAAGGCGAACGCCATCAGTGTGGGCCCATG52N/AssDNAVibrio Parahaemolyticus (ATCC 17802)Whole cellIdentify high‐affinity aptamers that specifically recognize Vp.N/A2Real-Time Quantitative Polymerase Chain Reaction (RT-qPCR)N/ADetectionAM X‐aptamer kitY = phenol‐dU, five additional Ts at the 5'‐end, and 3'-CCATGN/AN/AN/AN/AN/A
ABdb_1446 327246452020Selection of aptamers targeted to food-borne pathogenic bacteria Vibrio parahaemolyticusS.184004.T1.03 (ID 7)TTTTTAAGCCCACCYCCGWYCGAAGGCCACAGCYCATGCGCGTGGGCCCATG52N/AssDNAVibrio Parahaemolyticus (ATCC 17802)Whole cellIdentify high‐affinity aptamers that specifically recognize Vp.N/A2Real-Time Quantitative Polymerase Chain Reaction (RT-qPCR)N/ADetectionAM X‐aptamer kitY = phenol‐dU,W = indole‐dU, five additional Ts at the 5'-end, and 3'-CCATGN/AN/AN/AN/AN/A
ABdb_1447 327246452020Selection of aptamers targeted to food-borne pathogenic bacteria Vibrio parahaemolyticusS.184004.T1.04 (ID 8)TTTTTAACACGACCCCACYGTGCGAGCCGAACACCACCACGGTGGGCCCATG52N/AssDNAVibrio Parahaemolyticus (ATCC 17802)Whole cellIdentify high‐affinity aptamers that specifically recognize Vp.N/A2Real-Time Quantitative Polymerase Chain Reaction (RT-qPCR)N/ADetectionAM X‐aptamer kitY = phenol‐dU, five additional Ts at the 5'‐end, and 3'-CCATGN/AN/AN/AN/AN/A
ABdb_1448 327246452020Selection of aptamers targeted to food-borne pathogenic bacteria Vibrio parahaemolyticusS.184004.T1.05 (ID 9)TTTTTAACACGACXYAGCYGTGWGGGCCGAACACCAGGCACGTGGGCCCATG52N/AssDNAVibrio Parahaemolyticus (ATCC 17802)Whole cellIdentify high‐affinity aptamers that specifically recognize Vp.N/A2Real-Time Quantitative Polymerase Chain Reaction (RT-qPCR)N/ADetectionAM X‐aptamer kitX = amine‐dU,Y = phenol‐dU, five additional Ts at the 5'‐end, and CCATG at the 3′‐end, five additional Ts at the 5′‐end, and 3'-CCATGN/AN/AN/AN/AN/A
ABdb_1449 327246452020Selection of aptamers targeted to food-borne pathogenic bacteria Vibrio parahaemolyticusS.184004.T1.06 (ID 12)TTTTTAACACGACAGCAGWYCGGCGGGCACAGTGCGTGCGAGXCGYGCCATG52N/AssDNAVibrio Parahaemolyticus (ATCC 17802)Whole cellIdentify high‐affinity aptamers that specifically recognize Vp.Aptamer ID 12 showed specific binding to Vp.2Real-Time Quantitative Polymerase Chain Reaction (RT-qPCR)N/ADetectionAM X‐aptamer kitW = indole‐dU,Y = phenol‐dU,X = amine‐dU, five additional Ts at the 5'‐end, and 3'-CCATGN/AN/ABest CandidateN/AN/A
ABdb_1450 327246452020Selection of aptamers targeted to food-borne pathogenic bacteria Vibrio parahaemolyticusS.184004.T1.07 (ID 13)TTTTTAACACGACCAWACYGTGGCAGACGAACGCCGTCACAGTGGGCCCATG52N/AssDNAVibrio Parahaemolyticus (ATCC 17802)Whole cellIdentify high‐affinity aptamers that specifically recognize Vp.N/A2Real-Time Quantitative Polymerase Chain Reaction (RT-qPCR)N/ADetectionAM X‐aptamer kitY = phenol‐dU,W = indole‐dU, five additional Ts at the 5'‐end, and 3'-CCATGN/AN/AN/AN/AN/A
ABdb_1451 327246452020Selection of aptamers targeted to food-borne pathogenic bacteria Vibrio parahaemolyticusS.184004.T1.08 (ID 14)TTTTTAAGCCCACGCGGCYGTGAGXCGCACAGCCAWAGCACGTGGGCCCATG52N/AssDNAVibrio Parahaemolyticus (ATCC 17802)Whole cellIdentify high‐affinity aptamers that specifically recognize Vp.N/A2Real-Time Quantitative Polymerase Chain Reaction (RT-qPCR)N/ADetectionAM X‐aptamer kitW = indole‐dU,Y = phenol‐dU,X = amine‐dU, five additional Ts at the 5'‐end, and 3'-CCATGN/AN/AN/AN/AN/A
ABdb_1452 327246452020Selection of aptamers targeted to food-borne pathogenic bacteria Vibrio parahaemolyticusS.184004.T1.09 (ID 15)GCCCACTGAACTGTGGCGGGCACAGGATGTGGAAGTGGGC40N/AssDNAVibrio Parahaemolyticus (ATCC 17802)Whole cellIdentify high‐affinity aptamers that specifically recognize Vp.N/A2Real-Time Quantitative Polymerase Chain Reaction (RT-qPCR)N/ADetectionAM X‐aptamer kitN/AN/AN/AN/AN/AN/A