Designing of Antibacterial peptides

This Module has been developed to design all possible alternate/mutants of the submitted peptide. Users are allowed to paste or upload file with multiple peptide sequences, and the new peptide is formed by mutating a single residue at a time. It can also provide a prediction score, according to the model selected, to identify the peptides with antibacterial activity. Users can also sort the prediction score to find the highest-scored/best mutant peptide, which has antibacterial properties. Further, the user can also generate several mutant peptides of the given sequence. It allows the user to design the best mutant with the highest score.


For more help please visit: Help

Type or paste peptide sequence(s) in single letter code (in FASTA format):

    


OR   Select Prediction Model:
Gram-positive (GP ABPs V/s non-ABPs)  
 Gram-negative (GN ABPs V/s non-ABPs)  
 Gram-variable (GV ABPs V/s non-ABPs)  
Choose Probability Threshold For Gram-positive Model:  
Physicochemical Properties to Be Displayed :

 Hydrophobicity    Steric hinderance    Side bulk    Hydropathicity    Amphipathicity   

 Hydrophilicity     Net Hydrogen     Charge     pI     Molecular weight