Complete Annotation based on single PDB Chain

This module is designed for complete structural annotation of a protein sequence using single PDB chain supplied by user. Server align query protein sequence and sequence of PDB chain to annotate query protein based on its alignment with PDB chain. This module provides complete annotation of a query protein that includes ligand inteacting residues, secondary structure, turns and DNA interacting residues in a protein.

Sequence Submission Form

Paste your Protein sequence in FASTA format (single sequence only)

       Enter PDB Chain against which query sequence is to be aligned          


 Select DSSP State  Eight DSSP state
[H,G,I,B,E,T,S,C]		  Standard 3-states
[H=(G,H,I); E=(B,E); C=(T,S)]