Blast-Search page of ThPDB2

Blast-Search page assists the user to run a BLAST search against the custom database generated using sequences in ThPDB2 database. After submission of the job, it returns the list of sequences similar to the query sequence. The server provides options to choose different parameters like weight matrix and expectation value. For more information see HELP page.
Search a Given Sequence
Paste your protein sequence in FASTA format.  ()

By default all the parameters of Blast are set for protein blast.
User can change the parameters as per the needs.
E-Value   Matrix   Word Size   SEG Filtering   Compositional Biasness