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Biomarker Card

This biomarker card gives comprehensive information about each biomarker.
Detailed Information
Biomarker ID1848
PMID30890858
Year2019
BiomarkerIKZF3 (IKAROS family zinc finger 3 (Aiolos), transcript variant 12); USP13 (Ubiquitin-specific peptidase 13 (isopeptidase T-3)); CLASP1 (Cytoplasmic linker associated protein 1, transcript variant 3); CEP112 (Centrosomal protein 112kDa, transcript variant 3); TSEN15 (tRNA splicing endonuclease subunit, transcript variant 1); FLVCR2 (Feline leukemia virus subgroup C cellular receptor family, member 2,transcript variant 2); GOLGA8B (Golgin A8 family, member B, transcript variant 1); ZNF438 (Zinc finger protein 438, transcript variant 1); SCARNA22 (Small Cajal body-specific RNA 22); LPPR1 (Lipid phosphate phosphatase-related protein type 1, transcript variant 2); PTGFR (Prostaglandin F receptor (FP), transcript variant 1); NREP (Neuronal regeneration related protein, transcript variant 1);
Biomarker BasisExpression Based
BiomoleculemRNA
SourceTissue
SubjectsHumans
RegulationDifferentially Expressed
Odds Ratio/Hazard Ratio/Relative RiskNA
Effect on PathwaysNA
ExperimentTumor Stage T2c Vs T3/4
Type of BiomarkerPrognostic
Cohort14 patients had tumor stage T1c, 10 had T2, 23 had T2a, 11 had T2b, 30 had T2c, 2 had T3, 6 had T3a, 8 had T3b, 1 had T4. Dataset: Long et. all
SenstivityNA
SpecificityNA
AUC0.957
Accuracy98.8%
Level Of Significancep<0.05
Method UsedRNA-Seq
ClinicalNo
RemarksNA
Clinical Trial NumberNA
Degree Of ValidityNot validated on independent patient dataset
Technical NameNA