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Biomarker Card

This biomarker card gives comprehensive information about each biomarker.
Detailed Information
Biomarker ID139
PMID17459658
Year2007
BiomarkerCCNE2+CDC6+FBP1+HOXC6+MKI67+MYBL2+PTTG1+DTL+UBE2C+WNT5A+ALCAM+AZGP1+CCK+MYLK+PPAP2B+PROK1
Biomarker BasisExpression Based
BiomoleculemRNA
SourceTissue
SubjectsHumans
RegulationIncreased GEX Score with relapse
Odds Ratio/Hazard Ratio/Relative RiskNA
Effect on PathwaysPathways include (UBE2C): Inactivation of APC/C via direct inhibition of the APC/C complex, Autodegradation of Cdh1 by Cdh1-APC/C, APC/C-mediated degradation of cell cycle proteins, Cell cycle checkpoints, Interleukin-1 signaling pathway
ExperimentRelapse Vs No Relapse
Type of BiomarkerPrognostic
Cohort71 patients with Prostate Cancer were included. 55 of them did not relapse and 16 did.
SenstivityNA
SpecificityNA
AUC0.73
AccuracyNA
Level Of Significancep=0.007
Method Usedarray based DASL
ClinicalNo
Remarks16 genes combined together to form GEX score. For all the selected genes, we fitted linear models (using the rlm function with method “MM” in the MASS library of the R statistical package) to predict Gleason grades and used the average of 16 independently derived predicted values, GEX, as a gene expression analogy of the Gleason grade.
Clinical Trial NumberNA
Degree Of ValidityNot validated on independent patient dataset
Technical NameCCNE2, CDC6, FBP1, HOXC6, MKI67, MYBL2, PTTG1, DTL, UBE2C, WNT5A, ALCAM, AZGP1, CCK, MYLK, PLPP3, PROK1