Welcome to siRNA prediction page
----------------------------------------------------------------------------------------------------------------------------------------------------
These are predicted siRNA using Orf8 protein of Coronavirus. Antisense sequences of siRNAs: Antisense strand targeting mRNA sequence. Position on mRNA: denotes the position of first nucleotide of mRNA target sequence. mRNA target sequence: denotes sequence of mRNA against which siRNA is generated. Target accessibility: Probability of target sequence to be unpaired for binding with siRNA. Efficacy: denotes the efficacy of siRNAs (highest efficacy more potent to degrade the mRNA). Sequences are in descending order of efficacy.
------------------------------------------------------------------------------------------------------------------------------------------------------
Click here to download
| Antisense Sequences of siRNA | Position on mRNA | mRNA target sequence | Target accessibility | Efficacy |
| [1] UGAUACUCUAAAAAGUCUU | 3 | AAGACUUUUUAGAGUAUCA | 0.946683 | 0.922588 |
| [2] UUCAUAGAACGAACAACGC | 12 | GCGUUGUUCGUUCUAUGAA | 0.622596 | 0.852361 |
| [3] AUGAUACUCUAAAAAGUCU | 4 | AGACUUUUUAGAGUAUCAU | 0.948241 | 0.851069 |
| [4] UUUAGGUUCCUGGCAAUUA | 2 | UAAUUGCCAGGAACCUAAA | 0.693311 | 0.84969 |
| [5] UUUAGGUUCCUGGCAAUUA | 1 | UAAUUGCCAGGAACCUAAA | 0.698493 | 0.849545 |
|| CoronaVir || India_MOHFW || WHO Advisory || Status || Diagnostics Tests || Genome || Patient Mangagement || Drug Design || Raghava's Group ||
Disclaimer and CopyrightThis web site maintains information or links, collected and compiled from a wide range of sources (e.g., literature, databases, internet). Our aim is to facilitate the community to fight against COVID-19 but WITHOUT ANY WARRANTY OF RELIABILITY.