Welcome to siRNA prediction page
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These are predicted siRNA using Orf6 protein of Coronavirus. Antisense sequences of siRNAs: Antisense strand targeting mRNA sequence. Position on mRNA: denotes the position of first nucleotide of mRNA target sequence. mRNA target sequence: denotes sequence of mRNA against which siRNA is generated. Target accessibility: Probability of target sequence to be unpaired for binding with siRNA. Efficacy: denotes the efficacy of siRNAs (highest efficacy more potent to degrade the mRNA). Sequences are in descending order of efficacy.
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| Antisense Sequences of siRNA | Position on mRNA | mRNA target sequence | Target accessibility | Efficacy |
| [1] UUUAUUCUCAGUUAGUGAC | 12 | GUCACUAACUGAGAAUAAA | 0.653936 | 1.033839 |
| [2] UUUAUUCUCAGUUAGUGAC | 2 | GUCACUAACUGAGAAUAAA | 0.779677 | 1.030671 |
| [3] UUUAUUCUCAGUUAGUGAC | 3 | GUCACUAACUGAGAAUAAA | 0.784074 | 1.030549 |
| [4] UUUAUUCUCAGUUAGUGAC | 4 | GUCACUAACUGAGAAUAAA | 0.784196 | 1.03053 |
| [5] UUUAUUCUCAGUUAGUGAC | 5 | GUCACUAACUGAGAAUAAA | 0.786893 | 1.030458 |
|| CoronaVir || India_MOHFW || WHO Advisory || Status || Diagnostics Tests || Genome || Patient Mangagement || Drug Design || Raghava's Group ||
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