Welcome to siRNA prediction page
----------------------------------------------------------------------------------------------------------------------------------------------------
These are predicted siRNA using Orf1ab protein of Coronavirus. Antisense sequences of siRNAs: Antisense strand targeting mRNA sequence. Position on mRNA: denotes the position of first nucleotide of mRNA target sequence. mRNA target sequence: denotes sequence of mRNA against which siRNA is generated. Target accessibility: Probability of target sequence to be unpaired for binding with siRNA. Efficacy: denotes the efficacy of siRNAs (highest efficacy more potent to degrade the mRNA). Sequences are in descending order of efficacy.
------------------------------------------------------------------------------------------------------------------------------------------------------
Click here to download
| Antisense Sequences of siRNA | Position on mRNA | mRNA target sequence | Target accessibility | Efficacy |
| [1] AAAUUGAUCGUACAACACG | 12 | CGUGUUGUACGAUCAAUUU | 0.636979 | 1.129115 |
| [2] UUGAGUAAACAAAAGAGGC | 12 | GCCUCUUUUGUUUACUCAA | 0.751294 | 1.098182 |
| [3] UAAGUGUCCACACUCUCCU | 1 | AGGAGAGUGUGGACACUUA | 0.772127 | 1.096212 |
| [4] UUUAGUCUUAGGGUCGUAC | 8 | GUACGACCCUAAGACUAAA | 0.756365 | 1.083629 |
| [5] UAGAAUUGUCUACAUAAGC | 12 | GCUUAUGUAGACAAUUCUA | 0.837814 | 1.07697 |
|| CoronaVir || India_MOHFW || WHO Advisory || Status || Diagnostics Tests || Genome || Patient Mangagement || Drug Design || Raghava's Group ||
Disclaimer and CopyrightThis web site maintains information or links, collected and compiled from a wide range of sources (e.g., literature, databases, internet). Our aim is to facilitate the community to fight against COVID-19 but WITHOUT ANY WARRANTY OF RELIABILITY.