Welcome to siRNA prediction page
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These are predicted siRNA using nucleocapsid phosphoprotein of Coronavirus. Antisense sequences of siRNAs: Antisense strand targeting mRNA sequence. Position on mRNA: denotes the position of first nucleotide of mRNA target sequence. mRNA target sequence: denotes sequence of mRNA against which siRNA is generated. Target accessibility: Probability of target sequence to be unpaired for binding with siRNA. Efficacy: denotes the efficacy of siRNAs (highest efficacy more potent to degrade the mRNA). Sequences are in descending order of efficacy.
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| Antisense Sequences of siRNA | Position on mRNA | mRNA target sequence | Target accessibility | Efficacy |
| [1] UUUGUAUGCGUCAAUAUGC | 8 | GCAUAUUGACGCAUACAAA | 0.676377 | 1.033082 |
| [2] UCAUUUUACCGUCACCACC | 4 | GGUGGUGACGGUAAAAUGA | 0.829956 | 0.970318 |
| [3] UCAUUUUACCGUCACCACC | 2 | GGUGGUGACGGUAAAAUGA | 0.839957 | 0.970094 |
| [4] UGACAGUUUGGCCUUGUUG | 9 | CAACAAGGCCAAACUGUCA | 0.75363 | 0.93025 |
| [5] UUCAUUUUACCGUCACCAC | 1 | GUGGUGACGGUAAAAUGAA | 0.703754 | 0.916145 |
|| CoronaVir || India_MOHFW || WHO Advisory || Status || Diagnostics Tests || Genome || Patient Mangagement || Drug Design || Raghava's Group ||
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