Welcome to siRNA prediction page
----------------------------------------------------------------------------------------------------------------------------------------------------
These are predicted siRNA using nucleocapsid phosphoprotein of Coronavirus. Antisense sequences of siRNAs: Antisense strand targeting mRNA sequence. Position on mRNA: denotes the position of first nucleotide of mRNA target sequence. mRNA target sequence: denotes sequence of mRNA against which siRNA is generated. Target accessibility: Probability of target sequence to be unpaired for binding with siRNA. Efficacy: denotes the efficacy of siRNAs (highest efficacy more potent to degrade the mRNA). Sequences are in descending order of efficacy.
------------------------------------------------------------------------------------------------------------------------------------------------------
![](images/download.png)
Antisense Sequences of siRNA | Position on mRNA | mRNA target sequence | Target accessibility | Efficacy |
[1] UUUGUAUGCGUCAAUAUGC | 8 | GCAUAUUGACGCAUACAAA | 0.676377 | 1.033082 |
[2] UCAUUUUACCGUCACCACC | 4 | GGUGGUGACGGUAAAAUGA | 0.829956 | 0.970318 |
[3] UCAUUUUACCGUCACCACC | 2 | GGUGGUGACGGUAAAAUGA | 0.839957 | 0.970094 |
[4] UGACAGUUUGGCCUUGUUG | 9 | CAACAAGGCCAAACUGUCA | 0.75363 | 0.93025 |
[5] UUCAUUUUACCGUCACCAC | 1 | GUGGUGACGGUAAAAUGAA | 0.703754 | 0.916145 |
|| CoronaVir || India_MOHFW || WHO Advisory || Status || Diagnostics Tests || Genome || Patient Mangagement || Drug Design || Raghava's Group ||
Disclaimer and CopyrightThis web site maintains information or links, collected and compiled from a wide range of sources (e.g., literature, databases, internet). Our aim is to facilitate the community to fight against COVID-19 but WITHOUT ANY WARRANTY OF RELIABILITY.